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The map label for this gene is ywbD [H]

Identifier: 66047399

GI number: 66047399

Start: 4962108

End: 4963124

Strand: Direct

Name: ywbD [H]

Synonym: Psyr_4172

Alternate gene names: 66047399

Gene position: 4962108-4963124 (Clockwise)

Preceding gene: 66047396

Following gene: 66047400

Centisome position: 81.43

GC content: 61.95

Gene sequence:

>1017_bases
ATGTCTTCCTTGAATCAGGCGCTCAGCGTCGCCCTCGACAATCGCCAGGCGTTGCTTGACCAATTGCATGGACAGGGCAC
GGACTGCTATCGACTGTTTCACGGCAGCCAGGAGGGTGCCAGCGGGCTGACCATCGACCGCTACGGCCCGCAATTGCTGG
TGCAGAGCTTTCACACCCGCCTGGATCGCGATGCCCTGCTGGCGCTGCATGAACAGGTCAACACGCGCCTGGGCCTGGAC
ACCCTGCTGGTCTATAACGATCGCTCGCAAGGCAACTCGCGCGTCGATCGCCACGACACCGTGTACAAGGCTGAAGACGC
GGCTCTGGCCGATCATGTCGGCCACGAATGGGGGCTCAATTACCGGGTCCGCGGTCGGCATGCAGGCCAGGACCCGCTGT
TGTTTCTGGACCTGCGCAACACCCGCGGCTGGGTCAAGCAGCACAGCGCCGGCAAAAGCGTGCTGAACCTGTTCGCCTAC
ACCTGCGGCGTCGGCCTGAGTGCGGCGGCCGGTGGCGCGAGTGAAGTGTGCAATCTCGATTTCGCCGAGGGCAATCTGGC
GGTGGGTCGCGAGAATGGTGCGCTCAACCCGCAACTGCCACCCATGCAATTCATCCAGTCGGATTATTTTCCGGCGATCC
GCCAGTTGGCCGGGTTGCCCATTGCTGCGCGCCGCAGCCAGCAATTGCCCAGCTACGTGAAACTGCAACAGCGCCAATAT
GATCTGGTCCTGCTCGATCCACCGGCCTGGGCCAAGAGTGCGTTCGGCACCGTTGATTTGCTGCGCGACTATCAGAGCCT
GCTCAAACCTGCACTGTTGACCACAGCAGACGATGGCGTGCTGATCTGCTGCAACAATCTGGCGAAAGTCAGCATGCAGG
ACTGGCGCGAGCAGGTGCTGCGCTGCGCCACCAAGGCCGGGCGTCCAGTGCGCGACTGCCAGGAAATGCGTCCCGCCGCA
GACTTCCCGTCTCAGGATAATCAACCACCGCTGAAAACGCTGATTCTGCAACTCTGA

Upstream 100 bases:

>100_bases
ATGACAACGCAGGAGATCAAGCGCATGGCAGACGCCAAAAACCCCCGGCGCCCGGTAACTGGTAAACTCCCGCGCCTTAT
TCCAGCCCGAGGCGCTCAGC

Downstream 100 bases:

>100_bases
CTCGGCGCCTGATATCGTCAAGCGCAACCGGAAAAATCCTACAAGCCGCGAGGGCAATGCCTTGGGAACCGAACAGGCAT
GCCATACTCCAAGGGCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSSLNQALSVALDNRQALLDQLHGQGTDCYRLFHGSQEGASGLTIDRYGPQLLVQSFHTRLDRDALLALHEQVNTRLGLD
TLLVYNDRSQGNSRVDRHDTVYKAEDAALADHVGHEWGLNYRVRGRHAGQDPLLFLDLRNTRGWVKQHSAGKSVLNLFAY
TCGVGLSAAAGGASEVCNLDFAEGNLAVGRENGALNPQLPPMQFIQSDYFPAIRQLAGLPIAARRSQQLPSYVKLQQRQY
DLVLLDPPAWAKSAFGTVDLLRDYQSLLKPALLTTADDGVLICCNNLAKVSMQDWREQVLRCATKAGRPVRDCQEMRPAA
DFPSQDNQPPLKTLILQL

Sequences:

>Translated_338_residues
MSSLNQALSVALDNRQALLDQLHGQGTDCYRLFHGSQEGASGLTIDRYGPQLLVQSFHTRLDRDALLALHEQVNTRLGLD
TLLVYNDRSQGNSRVDRHDTVYKAEDAALADHVGHEWGLNYRVRGRHAGQDPLLFLDLRNTRGWVKQHSAGKSVLNLFAY
TCGVGLSAAAGGASEVCNLDFAEGNLAVGRENGALNPQLPPMQFIQSDYFPAIRQLAGLPIAARRSQQLPSYVKLQQRQY
DLVLLDPPAWAKSAFGTVDLLRDYQSLLKPALLTTADDGVLICCNNLAKVSMQDWREQVLRCATKAGRPVRDCQEMRPAA
DFPSQDNQPPLKTLILQL
>Mature_337_residues
SSLNQALSVALDNRQALLDQLHGQGTDCYRLFHGSQEGASGLTIDRYGPQLLVQSFHTRLDRDALLALHEQVNTRLGLDT
LLVYNDRSQGNSRVDRHDTVYKAEDAALADHVGHEWGLNYRVRGRHAGQDPLLFLDLRNTRGWVKQHSAGKSVLNLFAYT
CGVGLSAAAGGASEVCNLDFAEGNLAVGRENGALNPQLPPMQFIQSDYFPAIRQLAGLPIAARRSQQLPSYVKLQQRQYD
LVLLDPPAWAKSAFGTVDLLRDYQSLLKPALLTTADDGVLICCNNLAKVSMQDWREQVLRCATKAGRPVRDCQEMRPAAD
FPSQDNQPPLKTLILQL

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=319, Percent_Identity=26.9592476489028, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787181, Length=274, Percent_Identity=24.8175182481752, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 37383; Mature: 37252

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLNQALSVALDNRQALLDQLHGQGTDCYRLFHGSQEGASGLTIDRYGPQLLVQSFHTR
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHH
LDRDALLALHEQVNTRLGLDTLLVYNDRSQGNSRVDRHDTVYKAEDAALADHVGHEWGLN
HCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHCCHHCCCC
YRVRGRHAGQDPLLFLDLRNTRGWVKQHSAGKSVLNLFAYTCGVGLSAAAGGASEVCNLD
EEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHCCCE
FAEGNLAVGRENGALNPQLPPMQFIQSDYFPAIRQLAGLPIAARRSQQLPSYVKLQQRQY
ECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCC
DLVLLDPPAWAKSAFGTVDLLRDYQSLLKPALLTTADDGVLICCNNLAKVSMQDWREQVL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHCCHHHHHHHHH
RCATKAGRPVRDCQEMRPAADFPSQDNQPPLKTLILQL
HHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SSLNQALSVALDNRQALLDQLHGQGTDCYRLFHGSQEGASGLTIDRYGPQLLVQSFHTR
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHH
LDRDALLALHEQVNTRLGLDTLLVYNDRSQGNSRVDRHDTVYKAEDAALADHVGHEWGLN
HCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHCCHHCCCC
YRVRGRHAGQDPLLFLDLRNTRGWVKQHSAGKSVLNLFAYTCGVGLSAAAGGASEVCNLD
EEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHCCCE
FAEGNLAVGRENGALNPQLPPMQFIQSDYFPAIRQLAGLPIAARRSQQLPSYVKLQQRQY
ECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHCCC
DLVLLDPPAWAKSAFGTVDLLRDYQSLLKPALLTTADDGVLICCNNLAKVSMQDWREQVL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHCCHHHHHHHHH
RCATKAGRPVRDCQEMRPAADFPSQDNQPPLKTLILQL
HHHHHCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]