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The map label for this gene is pcaC [H]

Identifier: 66047396

GI number: 66047396

Start: 4958938

End: 4959321

Strand: Direct

Name: pcaC [H]

Synonym: Psyr_4169

Alternate gene names: 66047396

Gene position: 4958938-4959321 (Clockwise)

Preceding gene: 66047395

Following gene: 66047399

Centisome position: 81.38

GC content: 62.76

Gene sequence:

>384_bases
ATGACAGACAAAACGATCAGCGACGGCGAACAGATCCGTCGCCAGGTGATGGGCGATGTCTACGTCGACCGCGCGCTGGG
CAATGCCACCGAGTTCAGCCAGCCGCTGCAGGATTTCGTCAACGAGCACGCCTGGGGCAGCGTCTGGAGTCGCGAGGGCC
TGCCATTGAAAACCCGCAGCCTGATCACCCTGGCCACTCTCACCGCCCTGAAATGCCCGCAAGAACTGAAGGGCCACGTT
CGTGGCGCACTGAACAATGGCTGCACGGTCGAGGAGATTCGCGAAGCGCTGCTGCACTGCGCGGTGTACGCCGGCGTGCC
AGCGGCCATCGACGCGTTTCGTGCGGCGCAGGAAGTGATCGACAGCTACGTCAAAGCGGATTAG

Upstream 100 bases:

>100_bases
TGGTGTTACCTGTGCTGGGCGCTGTGGTTGTCTGGGGCACGATCCGCGCCTGGCGACGCCAGCACTGACCTCAATCCGCA
TCGATACAAGGAGCAAGGCC

Downstream 100 bases:

>100_bases
ATCCAGCCGCCCCATTGCAGGATGAAAATCCCCACGTTGGTCGTGACCGCGGCAGCCAGCGTGGTGATGACAATGATCGC
GGCAGCCAGCTCGTAGTTGC

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTDKTISDGEQIRRQVMGDVYVDRALGNATEFSQPLQDFVNEHAWGSVWSREGLPLKTRSLITLATLTALKCPQELKGHV
RGALNNGCTVEEIREALLHCAVYAGVPAAIDAFRAAQEVIDSYVKAD

Sequences:

>Translated_127_residues
MTDKTISDGEQIRRQVMGDVYVDRALGNATEFSQPLQDFVNEHAWGSVWSREGLPLKTRSLITLATLTALKCPQELKGHV
RGALNNGCTVEEIREALLHCAVYAGVPAAIDAFRAAQEVIDSYVKAD
>Mature_126_residues
TDKTISDGEQIRRQVMGDVYVDRALGNATEFSQPLQDFVNEHAWGSVWSREGLPLKTRSLITLATLTALKCPQELKGHVR
GALNNGCTVEEIREALLHCAVYAGVPAAIDAFRAAQEVIDSYVKAD

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13930; Mature: 13799

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKTISDGEQIRRQVMGDVYVDRALGNATEFSQPLQDFVNEHAWGSVWSREGLPLKTRS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHH
LITLATLTALKCPQELKGHVRGALNNGCTVEEIREALLHCAVYAGVPAAIDAFRAAQEVI
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DSYVKAD
HHHHCCC
>Mature Secondary Structure 
TDKTISDGEQIRRQVMGDVYVDRALGNATEFSQPLQDFVNEHAWGSVWSREGLPLKTRS
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHH
LITLATLTALKCPQELKGHVRGALNNGCTVEEIREALLHCAVYAGVPAAIDAFRAAQEVI
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DSYVKAD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]