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The map label for this gene is yrbD [C]

Identifier: 66047366

GI number: 66047366

Start: 4928661

End: 4929128

Strand: Reverse

Name: yrbD [C]

Synonym: Psyr_4139

Alternate gene names: 66047366

Gene position: 4929128-4928661 (Counterclockwise)

Preceding gene: 66047367

Following gene: 66047365

Centisome position: 80.89

GC content: 54.7

Gene sequence:

>468_bases
ATGCAAAACCGTGCCATCGAAACCGGAGTCGGTCTGTTCCTGCTGGCGGGGATACTGGCTCTGCTCCTGCTGGCCCTGCG
AGTCAGTGGTCTGAGCACAAGCGCGAGCACCGACACCTATAAACTTTATGCCTACTTCGACAATATTGCCGGTTTGACTG
TCAGAGCCAAGGTAAGCATGGCTGGCGTCACGATCGGCAAGGTGACGGCGATCGATCTGGATCGCGATACCTTTACCGGT
CGCGTCACGCTGGAGATTCAGAAGAAGGTCGATAACCTGCCTTCGGACTCGACTGCGTCGATTCTGACGGCTGGTTTGCT
GGGTGAAAAATACATCGGTCTCAGCGTCGGTGGTGATGACAAGCTGCTCAAGGATGGCGGGACTATCCATGACACGCAGT
CGTCGCTGGTGCTGGAAGACCTGATCGGAAAATTCCTGCTCAATACTGTTAGTAAAGACGCCAAGTGA

Upstream 100 bases:

>100_bases
AGGGGATCAGTCGCGCGACGACCAGAACCGTCGTTTACGCCTCGTTGGCCGTGCTGGGACTGGACTTTATTTTGACCGCT
TTGATGTTTGGAGATTTCTG

Downstream 100 bases:

>100_bases
GGAGCTTCAAATGATCTCTATTCTGCGCCGTGGTCTGCTGGTATTGCTGGCCACTCTGCCAATGCTGGCGAATGCCGCGG
CGACCCCGTCGGCTCATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSMAGVTIGKVTAIDLDRDTFTG
RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGDDKLLKDGGTIHDTQSSLVLEDLIGKFLLNTVSKDAK

Sequences:

>Translated_155_residues
MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSMAGVTIGKVTAIDLDRDTFTG
RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGDDKLLKDGGTIHDTQSSLVLEDLIGKFLLNTVSKDAK
>Mature_155_residues
MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSMAGVTIGKVTAIDLDRDTFTG
RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGDDKLLKDGGTIHDTQSSLVLEDLIGKFLLNTVSKDAK

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=160, Percent_Identity=47.5, Blast_Score=135, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 16363; Mature: 16363

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEE
AGVTIGKVTAIDLDRDTFTGRVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGDD
CCEEECEEEEEECCCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCC
KLLKDGGTIHDTQSSLVLEDLIGKFLLNTVSKDAK
CEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEE
AGVTIGKVTAIDLDRDTFTGRVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGDD
CCEEECEEEEEECCCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEECCCC
KLLKDGGTIHDTQSSLVLEDLIGKFLLNTVSKDAK
CEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]