Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yhcB [C]

Identifier: 66047352

GI number: 66047352

Start: 4914340

End: 4914783

Strand: Direct

Name: yhcB [C]

Synonym: Psyr_4125

Alternate gene names: 66047352

Gene position: 4914340-4914783 (Clockwise)

Preceding gene: 66047348

Following gene: 66047357

Centisome position: 80.65

GC content: 60.36

Gene sequence:

>444_bases
GTGGAACACTCGCTCTTAGTCTGGTTGTTGCCGACGCTCGCCCTGGTGGCCGGTGTCGTCATTGGTTTTCTGGTGGCACG
CCTGCTGCCCAACACCGTTCCGAACAGCACCCAGCGCCAGCTGGATGACATTCAGGAGCGTTTCGACGCCTATCAGAACG
AGGTAGTCACGCACTTCAACAGCACGGCCAATCTGGTCCAAAAGCTTTCACAGAGCTATCAGGATGTTCAGGAACACCTT
GCCGAGGGCGCCAACCGCCTGGCTCTCGACGAGCTGACCCGCCAACGCTTGCTGGCCGCCCTGCACCCTGAGGCCAGTCA
TGCGCACCGCGATCATCGCGACCGCCTGACCCCGCCACGCGACACTGAAACACCCAAGGATTACGCCCCCAAGTCGCCCA
ATACCCCGGGCATGCTCGATGAGCATTACGGCTTGAAGAAGTAA

Upstream 100 bases:

>100_bases
GCTGATTGTCTGCGGCATGCATATCAACGATACGTCGCGGGTATACAGCGCAGGTTCGAGCCGTTAACGTAAAGCAAAGC
CGTTTATAGAGGAAGGACTC

Downstream 100 bases:

>100_bases
GCTTTCGCAGCCACACAAAAAGCCCGCCGCAGAGAGCATCTGCGGCGGGCTTTTCTGTGGATCGAAACTGCAATCCCTTG
CCCCGCTAGAGGCTATGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFNSTANLVQKLSQSYQDVQEHL
AEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPRDTETPKDYAPKSPNTPGMLDEHYGLKK

Sequences:

>Translated_147_residues
MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFNSTANLVQKLSQSYQDVQEHL
AEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPRDTETPKDYAPKSPNTPGMLDEHYGLKK
>Mature_147_residues
MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFNSTANLVQKLSQSYQDVQEHL
AEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPRDTETPKDYAPKSPNTPGMLDEHYGLKK

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16634; Mature: 16634

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STANLVQKLSQSYQDVQEHLAEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
DTETPKDYAPKSPNTPGMLDEHYGLKK
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
STANLVQKLSQSYQDVQEHLAEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
DTETPKDYAPKSPNTPGMLDEHYGLKK
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA