| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yhcB [C]
Identifier: 66047352
GI number: 66047352
Start: 4914340
End: 4914783
Strand: Direct
Name: yhcB [C]
Synonym: Psyr_4125
Alternate gene names: 66047352
Gene position: 4914340-4914783 (Clockwise)
Preceding gene: 66047348
Following gene: 66047357
Centisome position: 80.65
GC content: 60.36
Gene sequence:
>444_bases GTGGAACACTCGCTCTTAGTCTGGTTGTTGCCGACGCTCGCCCTGGTGGCCGGTGTCGTCATTGGTTTTCTGGTGGCACG CCTGCTGCCCAACACCGTTCCGAACAGCACCCAGCGCCAGCTGGATGACATTCAGGAGCGTTTCGACGCCTATCAGAACG AGGTAGTCACGCACTTCAACAGCACGGCCAATCTGGTCCAAAAGCTTTCACAGAGCTATCAGGATGTTCAGGAACACCTT GCCGAGGGCGCCAACCGCCTGGCTCTCGACGAGCTGACCCGCCAACGCTTGCTGGCCGCCCTGCACCCTGAGGCCAGTCA TGCGCACCGCGATCATCGCGACCGCCTGACCCCGCCACGCGACACTGAAACACCCAAGGATTACGCCCCCAAGTCGCCCA ATACCCCGGGCATGCTCGATGAGCATTACGGCTTGAAGAAGTAA
Upstream 100 bases:
>100_bases GCTGATTGTCTGCGGCATGCATATCAACGATACGTCGCGGGTATACAGCGCAGGTTCGAGCCGTTAACGTAAAGCAAAGC CGTTTATAGAGGAAGGACTC
Downstream 100 bases:
>100_bases GCTTTCGCAGCCACACAAAAAGCCCGCCGCAGAGAGCATCTGCGGCGGGCTTTTCTGTGGATCGAAACTGCAATCCCTTG CCCCGCTAGAGGCTATGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFNSTANLVQKLSQSYQDVQEHL AEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPRDTETPKDYAPKSPNTPGMLDEHYGLKK
Sequences:
>Translated_147_residues MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFNSTANLVQKLSQSYQDVQEHL AEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPRDTETPKDYAPKSPNTPGMLDEHYGLKK >Mature_147_residues MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFNSTANLVQKLSQSYQDVQEHL AEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPRDTETPKDYAPKSPNTPGMLDEHYGLKK
Specific function: Unknown
COG id: COG3105
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16634; Mature: 16634
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH STANLVQKLSQSYQDVQEHLAEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC DTETPKDYAPKSPNTPGMLDEHYGLKK CCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEHSLLVWLLPTLALVAGVVIGFLVARLLPNTVPNSTQRQLDDIQERFDAYQNEVVTHFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH STANLVQKLSQSYQDVQEHLAEGANRLALDELTRQRLLAALHPEASHAHRDHRDRLTPPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC DTETPKDYAPKSPNTPGMLDEHYGLKK CCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA