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The map label for this gene is yraN [C]

Identifier: 66047341

GI number: 66047341

Start: 4905592

End: 4905963

Strand: Direct

Name: yraN [C]

Synonym: Psyr_4114

Alternate gene names: 66047341

Gene position: 4905592-4905963 (Clockwise)

Preceding gene: 66047340

Following gene: 66047342

Centisome position: 80.5

GC content: 57.8

Gene sequence:

>372_bases
ATGCAACGCAGCACCCGCCAGCAAGCAGGGCGCGAGGCTGAAGCCTTCGCCCTGCAGTTTTTGCAACGACAGGGGCTGCG
CCTGATTGAACAAAACTGGTTATGCAAACGCGGCGAGCTTGATCTAGTCATGCTTGACGGCGATACAGTAGTATTCGTCG
AAGTTCGCTACCGGCGCCATTCAGGCTGGGGCGGCGCCATGGAAAGCGTCGATTTTCGCAAGCAGGAGAAACTCGTCACG
GCCGCACAGCTTTTTCTGCAGCACGCAACGGCCTGGGCCAATCATCCTTGCCGTTTCGACGTGATCGCCATTGAAGGCGA
GCCTGGCAATGCCGCACCGCTGAACTGGATCAAGAGCGCTTTTGACAGCTGA

Upstream 100 bases:

>100_bases
GCAGCCTCAGCCTGAACCCTGGCCGTCGCGTCGAACGCCAACTGCCATGGGCCGAATTCGTCGACGGCAAGGTCCAGCGC
CTGCCGGACACGGCTCCTTG

Downstream 100 bases:

>100_bases
GCTGGCGCAGCGGCCCAGCCTGAGCCAGGAATGCAATACGCTACAGCCCTCACCGATTTCGCTATTTGTTTTGCCGGCTG
CACACCTTGTGTGCCGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MQRSTRQQAGREAEAFALQFLQRQGLRLIEQNWLCKRGELDLVMLDGDTVVFVEVRYRRHSGWGGAMESVDFRKQEKLVT
AAQLFLQHATAWANHPCRFDVIAIEGEPGNAAPLNWIKSAFDS

Sequences:

>Translated_123_residues
MQRSTRQQAGREAEAFALQFLQRQGLRLIEQNWLCKRGELDLVMLDGDTVVFVEVRYRRHSGWGGAMESVDFRKQEKLVT
AAQLFLQHATAWANHPCRFDVIAIEGEPGNAAPLNWIKSAFDS
>Mature_123_residues
MQRSTRQQAGREAEAFALQFLQRQGLRLIEQNWLCKRGELDLVMLDGDTVVFVEVRYRRHSGWGGAMESVDFRKQEKLVT
AAQLFLQHATAWANHPCRFDVIAIEGEPGNAAPLNWIKSAFDS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=119, Percent_Identity=43.6974789915966, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4114_PSEU2 (Q4ZNX8)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_237182.1
- ProteinModelPortal:   Q4ZNX8
- STRING:   Q4ZNX8
- GeneID:   3369651
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_4114
- NMPDR:   fig|205918.4.peg.4549
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   PRK12497
- BioCyc:   PSYR205918:PSYR_4114-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14032; Mature: 14032

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRSTRQQAGREAEAFALQFLQRQGLRLIEQNWLCKRGELDLVMLDGDTVVFVEVRYRRH
CCCCCHHHCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEC
SGWGGAMESVDFRKQEKLVTAAQLFLQHATAWANHPCRFDVIAIEGEPGNAAPLNWIKSA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHH
FDS
HCC
>Mature Secondary Structure
MQRSTRQQAGREAEAFALQFLQRQGLRLIEQNWLCKRGELDLVMLDGDTVVFVEVRYRRH
CCCCCHHHCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEEEC
SGWGGAMESVDFRKQEKLVTAAQLFLQHATAWANHPCRFDVIAIEGEPGNAAPLNWIKSA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHH
FDS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA