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The map label for this gene is yraM [C]

Identifier: 66047340

GI number: 66047340

Start: 4903778

End: 4905592

Strand: Direct

Name: yraM [C]

Synonym: Psyr_4113

Alternate gene names: 66047340

Gene position: 4903778-4905592 (Clockwise)

Preceding gene: 66047322

Following gene: 66047341

Centisome position: 80.47

GC content: 64.3

Gene sequence:

>1815_bases
ATGATCGCTTGTCTGCGGCTGCTCTCTGCCCTCTGCCTCGCTGCCCTCCTCGCAGCCTGTGCCAGCTCGCCCTCGTCCAG
CCTTGGCGAGCTGCCTCGAACCCCTGATGCCAGTATCGAGCAATTGCTCGAGCAGGCCGCCAGCGCCAAAACACCCGAGC
AGGCCGCAACGCTGCGCTTGAGTGCTGCCGATCTGGCCAGCCGCCAGAATGACGCGGGGCGCGCCGCGCAAATCCTCGGA
CAGGTGCAAATCGATCAACTCAAGCCCGGCTTGCAGGTTTTCGCCAGCACACTGTCCGCTGAGCTGGCGATGGGCCGCAA
TCAACCCAAGGCAGCGCTGACCGCCCTGAATCATCCAAGCATGCAGCGCCTTGGCGAACTGTCGGTCGAGCAGCAGATTC
GCACTCACATGGTCAAGGCACGCGCTCTGGAAGCCGATGGTCAGGCTCTGGCAGCCGCCAACGAGCGGGTTTACGCCGGC
CCGCTGCTGCAAGGCACAGACGCCAGCGCCAACAATGACGCGATCTGGACACTGGTCTCCGCCCTGCCTGCCGAGCAACT
GCAGAGCACAGCCACCGACGATATGGGCGGCTGGCTGAACCTGGCTCGCTCGATCAAGGGCGCAGGCACGCTCGAGCAGC
AACAGGCTGCCATCGACAACTGGAAAGCGCAGAACCCTAAACACCCTGCTGCACTGCAATTGCCTACTGCCCTCGCGCAG
CTGCGTGCACTGACCAGCGAGCCGATTACCAAAATCGCCCTGCTGCTGCCGCAGGACGGTCAGTTGGCCGCGGTCGCCAA
GGCGTTGCGCGAAGGCTTCATGGCCGCGCACTTCCAGGCTCAGCAAGCAGGCGAGAATCCGCCGGCCATTCAGGTCTTCG
ACAGCTCGCGAATCACCTCGATGGACGAGTTCTACCGTCAGGCTCAGGCCGCTGGTGTGCAACTGGTCGTCGGTCCGCTG
GAAAAGAACCTCGTCAAACAGCTGAACAGCCGTCAGCAGCTGCCTATCACTACCCTGGCGCTGAACTACAGCGACACCAG
CAATGAAGGCCCTGCCCAGCTGTATCAGTTCGGCCTGGCCGCCGAAGACGAAGCCCGCGAGGTCGCACGTCGCGCCTGGG
CGGACGGCAAGCGCAGCGCCGTAGCGATGGTTCCGAAAGGCGAATGGGGCGACCGCGTGCTGGATGCCTTCCGCAAGAGC
TGGCAGGCCAAGGGCGGCACGCTGATCGCTGCAGAGCACGTTGATCAGCCCGTAGAACTGGCACAGCAGGTCGCCGACCT
GTTCCAGCTGCGCAACAGCGAAGGCCGCGCGCAACGCCTGCAAAGCACGGCCGGCACTCAGATCGCCGCTCAGCCAAGCC
GTCGCCAGGACATCGACTTCATGTTTCTCGCCGCGACCCCGCAACAAGCGCAGCAGATCAAACCCACCATGGTCTTCCAG
TACGCAGGTGACGTTCCGGTCTACGCCACTTCGCACCTGTTCACCAACAGCAACGATCACGCGCAATACATGGACCTGAA
TGGCGTGCGCTTCTGCGAAACGCCGTGGCTGCTGAACGCCGAAGACCCGCTGCGCCAGCAGGTCACCGCGCAATGGCCGC
AGGCCGCAGGCAGCCTGGGTCGCCTGTATGCGATGGGTATCGACGCCTATCGTCTGGCACCGCGCCTCGCCCAGCTCAAG
GCAATGCCTGACAGCCGCATTGACGGGCTGTCCGGCAGCCTCAGCCTGAACCCTGGCCGTCGCGTCGAACGCCAACTGCC
ATGGGCCGAATTCGTCGACGGCAAGGTCCAGCGCCTGCCGGACACGGCTCCTTGA

Upstream 100 bases:

>100_bases
CGCGACTGATATCACGGCTTTAAATACCTTCGACATCGCACCCCGGCCAGCGCTTGGGTACAATCCCCCGTTAATTCGCT
CGAGTTTCAGGAACATACCA

Downstream 100 bases:

>100_bases
TGCAACGCAGCACCCGCCAGCAAGCAGGGCGCGAGGCTGAAGCCTTCGCCCTGCAGTTTTTGCAACGACAGGGGCTGCGC
CTGATTGAACAAAACTGGTT

Product: LppC putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MIACLRLLSALCLAALLAACASSPSSSLGELPRTPDASIEQLLEQAASAKTPEQAATLRLSAADLASRQNDAGRAAQILG
QVQIDQLKPGLQVFASTLSAELAMGRNQPKAALTALNHPSMQRLGELSVEQQIRTHMVKARALEADGQALAAANERVYAG
PLLQGTDASANNDAIWTLVSALPAEQLQSTATDDMGGWLNLARSIKGAGTLEQQQAAIDNWKAQNPKHPAALQLPTALAQ
LRALTSEPITKIALLLPQDGQLAAVAKALREGFMAAHFQAQQAGENPPAIQVFDSSRITSMDEFYRQAQAAGVQLVVGPL
EKNLVKQLNSRQQLPITTLALNYSDTSNEGPAQLYQFGLAAEDEAREVARRAWADGKRSAVAMVPKGEWGDRVLDAFRKS
WQAKGGTLIAAEHVDQPVELAQQVADLFQLRNSEGRAQRLQSTAGTQIAAQPSRRQDIDFMFLAATPQQAQQIKPTMVFQ
YAGDVPVYATSHLFTNSNDHAQYMDLNGVRFCETPWLLNAEDPLRQQVTAQWPQAAGSLGRLYAMGIDAYRLAPRLAQLK
AMPDSRIDGLSGSLSLNPGRRVERQLPWAEFVDGKVQRLPDTAP

Sequences:

>Translated_604_residues
MIACLRLLSALCLAALLAACASSPSSSLGELPRTPDASIEQLLEQAASAKTPEQAATLRLSAADLASRQNDAGRAAQILG
QVQIDQLKPGLQVFASTLSAELAMGRNQPKAALTALNHPSMQRLGELSVEQQIRTHMVKARALEADGQALAAANERVYAG
PLLQGTDASANNDAIWTLVSALPAEQLQSTATDDMGGWLNLARSIKGAGTLEQQQAAIDNWKAQNPKHPAALQLPTALAQ
LRALTSEPITKIALLLPQDGQLAAVAKALREGFMAAHFQAQQAGENPPAIQVFDSSRITSMDEFYRQAQAAGVQLVVGPL
EKNLVKQLNSRQQLPITTLALNYSDTSNEGPAQLYQFGLAAEDEAREVARRAWADGKRSAVAMVPKGEWGDRVLDAFRKS
WQAKGGTLIAAEHVDQPVELAQQVADLFQLRNSEGRAQRLQSTAGTQIAAQPSRRQDIDFMFLAATPQQAQQIKPTMVFQ
YAGDVPVYATSHLFTNSNDHAQYMDLNGVRFCETPWLLNAEDPLRQQVTAQWPQAAGSLGRLYAMGIDAYRLAPRLAQLK
AMPDSRIDGLSGSLSLNPGRRVERQLPWAEFVDGKVQRLPDTAP
>Mature_604_residues
MIACLRLLSALCLAALLAACASSPSSSLGELPRTPDASIEQLLEQAASAKTPEQAATLRLSAADLASRQNDAGRAAQILG
QVQIDQLKPGLQVFASTLSAELAMGRNQPKAALTALNHPSMQRLGELSVEQQIRTHMVKARALEADGQALAAANERVYAG
PLLQGTDASANNDAIWTLVSALPAEQLQSTATDDMGGWLNLARSIKGAGTLEQQQAAIDNWKAQNPKHPAALQLPTALAQ
LRALTSEPITKIALLLPQDGQLAAVAKALREGFMAAHFQAQQAGENPPAIQVFDSSRITSMDEFYRQAQAAGVQLVVGPL
EKNLVKQLNSRQQLPITTLALNYSDTSNEGPAQLYQFGLAAEDEAREVARRAWADGKRSAVAMVPKGEWGDRVLDAFRKS
WQAKGGTLIAAEHVDQPVELAQQVADLFQLRNSEGRAQRLQSTAGTQIAAQPSRRQDIDFMFLAATPQQAQQIKPTMVFQ
YAGDVPVYATSHLFTNSNDHAQYMDLNGVRFCETPWLLNAEDPLRQQVTAQWPQAAGSLGRLYAMGIDAYRLAPRLAQLK
AMPDSRIDGLSGSLSLNPGRRVERQLPWAEFVDGKVQRLPDTAP

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=329, Percent_Identity=28.8753799392097, Blast_Score=129, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 65187; Mature: 65187

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIACLRLLSALCLAALLAACASSPSSSLGELPRTPDASIEQLLEQAASAKTPEQAATLRL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEE
SAADLASRQNDAGRAAQILGQVQIDQLKPGLQVFASTLSAELAMGRNQPKAALTALNHPS
HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHH
MQRLGELSVEQQIRTHMVKARALEADGQALAAANERVYAGPLLQGTDASANNDAIWTLVS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCHHHHHHH
ALPAEQLQSTATDDMGGWLNLARSIKGAGTLEQQQAAIDNWKAQNPKHPAALQLPTALAQ
HCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LRALTSEPITKIALLLPQDGQLAAVAKALREGFMAAHFQAQQAGENPPAIQVFDSSRITS
HHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH
MDEFYRQAQAAGVQLVVGPLEKNLVKQLNSRQQLPITTLALNYSDTSNEGPAQLYQFGLA
HHHHHHHHHHCCEEEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCC
AEDEAREVARRAWADGKRSAVAMVPKGEWGDRVLDAFRKSWQAKGGTLIAAEHVDQPVEL
CCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHH
AQQVADLFQLRNSEGRAQRLQSTAGTQIAAQPSRRQDIDFMFLAATPQQAQQIKPTMVFQ
HHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCHHHHHCCCEEEEE
YAGDVPVYATSHLFTNSNDHAQYMDLNGVRFCETPWLLNAEDPLRQQVTAQWPQAAGSLG
ECCCCCEEEEHEEECCCCCCCEEEECCCCEEECCCCEECCCCHHHHHHHHHCHHHHHHHH
RLYAMGIDAYRLAPRLAQLKAMPDSRIDGLSGSLSLNPGRRVERQLPWAEFVDGKVQRLP
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHCCHHHHHCCHHHCCC
DTAP
CCCC
>Mature Secondary Structure
MIACLRLLSALCLAALLAACASSPSSSLGELPRTPDASIEQLLEQAASAKTPEQAATLRL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEE
SAADLASRQNDAGRAAQILGQVQIDQLKPGLQVFASTLSAELAMGRNQPKAALTALNHPS
HHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHH
MQRLGELSVEQQIRTHMVKARALEADGQALAAANERVYAGPLLQGTDASANNDAIWTLVS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCHHHHHHH
ALPAEQLQSTATDDMGGWLNLARSIKGAGTLEQQQAAIDNWKAQNPKHPAALQLPTALAQ
HCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LRALTSEPITKIALLLPQDGQLAAVAKALREGFMAAHFQAQQAGENPPAIQVFDSSRITS
HHHHHCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH
MDEFYRQAQAAGVQLVVGPLEKNLVKQLNSRQQLPITTLALNYSDTSNEGPAQLYQFGLA
HHHHHHHHHHCCEEEEECHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCC
AEDEAREVARRAWADGKRSAVAMVPKGEWGDRVLDAFRKSWQAKGGTLIAAEHVDQPVEL
CCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHH
AQQVADLFQLRNSEGRAQRLQSTAGTQIAAQPSRRQDIDFMFLAATPQQAQQIKPTMVFQ
HHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCHHHHHCCCEEEEE
YAGDVPVYATSHLFTNSNDHAQYMDLNGVRFCETPWLLNAEDPLRQQVTAQWPQAAGSLG
ECCCCCEEEEHEEECCCCCCCEEEECCCCEEECCCCEECCCCHHHHHHHHHCHHHHHHHH
RLYAMGIDAYRLAPRLAQLKAMPDSRIDGLSGSLSLNPGRRVERQLPWAEFVDGKVQRLP
HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHCCHHHHHCCHHHCCC
DTAP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]