| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is yfcF [C]
Identifier: 66047319
GI number: 66047319
Start: 4878434
End: 4879060
Strand: Reverse
Name: yfcF [C]
Synonym: Psyr_4092
Alternate gene names: 66047319
Gene position: 4879060-4878434 (Counterclockwise)
Preceding gene: 66047320
Following gene: 66047318
Centisome position: 80.07
GC content: 60.77
Gene sequence:
>627_bases ATGAGCCTGCATCTGATTATCGGCGACAAACGCTACTCCTCCTGGTCGCTGCGTCCCTGGCTGGTGCTGGAAATGACCGG TGCTCCGTTCACCGATCAGGTTATCCGCCTCAACCAGCCTGACACCCGCGCGAACATTCTCAAGTATTCACCGACCGGCA AGGTCCCTGCGTTGCAGTGCGAGCACGGCACGATCATCGATTCGCTGGCCATTTGCGAATACCTGGTCGAGCGTTTTCCG GACGCTGACCTGTGGCCGAGCGACACCGCCGCGCGTGCCCAGGCGCGTTCTGCCTGCGCGCAGATGCACAGCGGTTTTGT CAGCCTGCGTTCGAATATGCCGATGGACCTGCGTCAGGATCAGGCACTGGAAGTGATTCCGGTCGATACCCAGAACGACA TCGACCGTATCGTCGAGCTGTGGGCCGAATGCCGCAATGCGGCGGCCGAAAGCGGTCCGTTTCTGTTCGGCAAGCCGAGC ATTGCCGATGCGTTCTTCGCGCCGGTGGCGATTCGTCTGCGCAGCTATCGTGTCGAGTTGCCCGCAGAAGCGCTGGCTTA CATCGAAACCATCTACCAATGGCCTGCCTTCAAACGCTGGCAGCAGGCCGGTCTGGAGGAGTCCTGA
Upstream 100 bases:
>100_bases TTCTCACGAGTACGTGAAGATCAATGCGGAATACCGCACCTGATTCAATGCCCGGCGCGCCGGCATCCTGTCTTCGCGCC GGGCTCAATGGAGCTGAACC
Downstream 100 bases:
>100_bases TCGTGAAACGAGTGCATGTGGCCGCCGCCGTCATTCGTGGTGCTGACGGCAGCGTATTGATTGCCCGACGTGCCGATACC CAGCATCAAGGTGGCCTCTG
Product: glutathione S-transferase
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Maleylacetoacetate Isomerase; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSLHLIIGDKRYSSWSLRPWLVLEMTGAPFTDQVIRLNQPDTRANILKYSPTGKVPALQCEHGTIIDSLAICEYLVERFP DADLWPSDTAARAQARSACAQMHSGFVSLRSNMPMDLRQDQALEVIPVDTQNDIDRIVELWAECRNAAAESGPFLFGKPS IADAFFAPVAIRLRSYRVELPAEALAYIETIYQWPAFKRWQQAGLEES
Sequences:
>Translated_208_residues MSLHLIIGDKRYSSWSLRPWLVLEMTGAPFTDQVIRLNQPDTRANILKYSPTGKVPALQCEHGTIIDSLAICEYLVERFP DADLWPSDTAARAQARSACAQMHSGFVSLRSNMPMDLRQDQALEVIPVDTQNDIDRIVELWAECRNAAAESGPFLFGKPS IADAFFAPVAIRLRSYRVELPAEALAYIETIYQWPAFKRWQQAGLEES >Mature_207_residues SLHLIIGDKRYSSWSLRPWLVLEMTGAPFTDQVIRLNQPDTRANILKYSPTGKVPALQCEHGTIIDSLAICEYLVERFPD ADLWPSDTAARAQARSACAQMHSGFVSLRSNMPMDLRQDQALEVIPVDTQNDIDRIVELWAECRNAAAESGPFLFGKPSI ADAFFAPVAIRLRSYRVELPAEALAYIETIYQWPAFKRWQQAGLEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23457; Mature: 23326
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHLIIGDKRYSSWSLRPWLVLEMTGAPFTDQVIRLNQPDTRANILKYSPTGKVPALQC CEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCEEEECCCCCCCEEEE EHGTIIDSLAICEYLVERFPDADLWPSDTAARAQARSACAQMHSGFVSLRSNMPMDLRQD CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QALEVIPVDTQNDIDRIVELWAECRNAAAESGPFLFGKPSIADAFFAPVAIRLRSYRVEL CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHEECC PAEALAYIETIYQWPAFKRWQQAGLEES CHHHHHHHHHHHHCHHHHHHHHCCCCCC >Mature Secondary Structure SLHLIIGDKRYSSWSLRPWLVLEMTGAPFTDQVIRLNQPDTRANILKYSPTGKVPALQC EEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCEEEECCCCCCCEEEE EHGTIIDSLAICEYLVERFPDADLWPSDTAARAQARSACAQMHSGFVSLRSNMPMDLRQD CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC QALEVIPVDTQNDIDRIVELWAECRNAAAESGPFLFGKPSIADAFFAPVAIRLRSYRVEL CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHEECC PAEALAYIETIYQWPAFKRWQQAGLEES CHHHHHHHHHHHHCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA