Click here to switch to the map view.

The map label for this gene is yvqK [H]

Identifier: 66047317

GI number: 66047317

Start: 4876641

End: 4877219

Strand: Direct

Name: yvqK [H]

Synonym: Psyr_4090

Alternate gene names: 66047317

Gene position: 4876641-4877219 (Clockwise)

Preceding gene: 66047316

Following gene: 66047322

Centisome position: 80.03

GC content: 61.49

Gene sequence:

>579_bases
ATGGGCTTTCGTTTGTCGAAGATTTACACGCGTACCGGCGATGCCGGTGAAACCGGTCTGGGCGATGGCCGACGCGTCTC
CAAGGATCATCCGCGCGTCGAGGCCATCGGTGAGGTCGATACGCTCAACAGCCAGCTGGGACTGTTGCTGGCGGGGCTGA
TCGATGAAGCTCAGCGCGTCCCGGCGCTCAACGAAGTGATCGAAGTACTTGCACCCTGCCAGCACCGACTGTTCGATCTG
GGCGGGGAACTGGCCATGCCGACCTACAAGGCGCTGAACGAAGCCGAGGTCGAGCGGCTGGAAGCCGCCATTGATGTCTG
GAATGAGGAACTGGGCCCGCTGGAGAATTTCATTTTGCCAGGCGGTTCATCGCTGATCGCCCAAGCGCACATCTGCCGTA
GCCTGGCACGCAGTGCAGAACGTCGCTGTCAGCATCTGAATGCCGTCGAGCCGCTGGAAGGCGCAGGGCTGGCGTACATC
AACAGGCTGTCGGACCTGCTGTTCGTCGCAGCCCGATTGATCGCCAGACGACAGGGCATTTCCGAGATCCTTTGGCAGCC
CGCGCCCAAGCCGCTTTGA

Upstream 100 bases:

>100_bases
CGGCACAGGCACCTGCTTTACGCTGCGTCTACCGCTGGTGGCCAACCCGGTCAGCGTTCAGCAGCAGGTCATTTCAAAAT
CCTGATCAGGAATCGCATCA

Downstream 100 bases:

>100_bases
TGGACATATCCATTAAACGGAGCATCACAGAAGACATCCTCACGCCAGCGTTCTGGCGTTAGGTATAGGTCTTGTGGGAG
TGAGCGAGGCGGGCTCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGFRLSKIYTRTGDAGETGLGDGRRVSKDHPRVEAIGEVDTLNSQLGLLLAGLIDEAQRVPALNEVIEVLAPCQHRLFDL
GGELAMPTYKALNEAEVERLEAAIDVWNEELGPLENFILPGGSSLIAQAHICRSLARSAERRCQHLNAVEPLEGAGLAYI
NRLSDLLFVAARLIARRQGISEILWQPAPKPL

Sequences:

>Translated_192_residues
MGFRLSKIYTRTGDAGETGLGDGRRVSKDHPRVEAIGEVDTLNSQLGLLLAGLIDEAQRVPALNEVIEVLAPCQHRLFDL
GGELAMPTYKALNEAEVERLEAAIDVWNEELGPLENFILPGGSSLIAQAHICRSLARSAERRCQHLNAVEPLEGAGLAYI
NRLSDLLFVAARLIARRQGISEILWQPAPKPL
>Mature_191_residues
GFRLSKIYTRTGDAGETGLGDGRRVSKDHPRVEAIGEVDTLNSQLGLLLAGLIDEAQRVPALNEVIEVLAPCQHRLFDLG
GELAMPTYKALNEAEVERLEAAIDVWNEELGPLENFILPGGSSLIAQAHICRSLARSAERRCQHLNAVEPLEGAGLAYIN
RLSDLLFVAARLIARRQGISEILWQPAPKPL

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=191, Percent_Identity=33.5078534031414, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI115534154, Length=183, Percent_Identity=33.879781420765, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20966; Mature: 20835

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRLSKIYTRTGDAGETGLGDGRRVSKDHPRVEAIGEVDTLNSQLGLLLAGLIDEAQRV
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PALNEVIEVLAPCQHRLFDLGGELAMPTYKALNEAEVERLEAAIDVWNEELGPLENFILP
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
GGSSLIAQAHICRSLARSAERRCQHLNAVEPLEGAGLAYINRLSDLLFVAARLIARRQGI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SEILWQPAPKPL
HHHHHCCCCCCC
>Mature Secondary Structure 
GFRLSKIYTRTGDAGETGLGDGRRVSKDHPRVEAIGEVDTLNSQLGLLLAGLIDEAQRV
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PALNEVIEVLAPCQHRLFDLGGELAMPTYKALNEAEVERLEAAIDVWNEELGPLENFILP
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCC
GGSSLIAQAHICRSLARSAERRCQHLNAVEPLEGAGLAYINRLSDLLFVAARLIARRQGI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SEILWQPAPKPL
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]