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The map label for this gene is yggA [H]

Identifier: 66047285

GI number: 66047285

Start: 4840661

End: 4841263

Strand: Direct

Name: yggA [H]

Synonym: Psyr_4058

Alternate gene names: 66047285

Gene position: 4840661-4841263 (Clockwise)

Preceding gene: 66047280

Following gene: 66047286

Centisome position: 79.44

GC content: 63.52

Gene sequence:

>603_bases
ATGTGGCAAAGCTACTTCAACGGATTGCTGATCGCCGCTGGCCTGATCATGGCCATTGGCTCGCAGAACGCATTCGTACT
GGCTCAGGGGCTGCGCCGTGAACACCACGTGTCAGTCGCGATGCTCTGCATTATCTGCGATGCCATTCTGGTCGCCGCCG
GGGTGTTCGGTCTGGCCAATGTGCTGGCGCAAAACCCGACCCTGCTGGCGGTGGCGCGCTGGGGCGGTGTGCTATTCCTC
AGTTGGTATGGCGTGCAGGCACTGCGCCGGGCCTGCTCGAAGCAGAGCCTCGAACACGGTGCCGCGGCTGGCAAAAGATC
GCGCCGCACGGTACTGCTCAGCGCATTGGCCGTGACGTTGCTCAACCCGCATGTGTACCTGGACACCGTACTACTGATCG
GCTCGCTCGGGGCACAACAGAGTGTGCCGGGCGCCTATGTAGCAGGCGCCGCGAGCGCTTCGTTGCTGTGGTTTTCCTGC
CTCGCCATCGGCGCGGCCTGGCTCGCTCCCTGGCTGGCCCGCCCTGCCACATGGCGTCTGCTGGATGTGATGGTGGCGGT
CATGATGTTCAGTGTGGCGTGGCAATTGATCCGTTCGGCCTGA

Upstream 100 bases:

>100_bases
AACATCAGTTTCCCTAATGAGAGATGATGATTATTGGTTTTACTTATATCGCTTCAACATTGAAAGTCGCCACCTGAATC
TGCTCGATGGGAACGTATTT

Downstream 100 bases:

>100_bases
AGGTTTCATGTCCGTTGAAGCAACAGCGCGGGAACCTCTATCCCACACAGTTGTTGCGTGGTTAAGCCGCAGGCCCGGTG
CTATAGTCCGGGGTCTGCGC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MWQSYFNGLLIAAGLIMAIGSQNAFVLAQGLRREHHVSVAMLCIICDAILVAAGVFGLANVLAQNPTLLAVARWGGVLFL
SWYGVQALRRACSKQSLEHGAAAGKRSRRTVLLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSC
LAIGAAWLAPWLARPATWRLLDVMVAVMMFSVAWQLIRSA

Sequences:

>Translated_200_residues
MWQSYFNGLLIAAGLIMAIGSQNAFVLAQGLRREHHVSVAMLCIICDAILVAAGVFGLANVLAQNPTLLAVARWGGVLFL
SWYGVQALRRACSKQSLEHGAAAGKRSRRTVLLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSC
LAIGAAWLAPWLARPATWRLLDVMVAVMMFSVAWQLIRSA
>Mature_200_residues
MWQSYFNGLLIAAGLIMAIGSQNAFVLAQGLRREHHVSVAMLCIICDAILVAAGVFGLANVLAQNPTLLAVARWGGVLFL
SWYGVQALRRACSKQSLEHGAAAGKRSRRTVLLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSC
LAIGAAWLAPWLARPATWRLLDVMVAVMMFSVAWQLIRSA

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=201, Percent_Identity=46.2686567164179, Blast_Score=154, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21315; Mature: 21315

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQSYFNGLLIAAGLIMAIGSQNAFVLAQGLRREHHVSVAMLCIICDAILVAAGVFGLAN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAQNPTLLAVARWGGVLFLSWYGVQALRRACSKQSLEHGAAAGKRSRRTVLLSALAVTL
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSCLAIGAAWLAPWLARPATWRL
HCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LDVMVAVMMFSVAWQLIRSA
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWQSYFNGLLIAAGLIMAIGSQNAFVLAQGLRREHHVSVAMLCIICDAILVAAGVFGLAN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAQNPTLLAVARWGGVLFLSWYGVQALRRACSKQSLEHGAAAGKRSRRTVLLSALAVTL
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LNPHVYLDTVLLIGSLGAQQSVPGAYVAGAASASLLWFSCLAIGAAWLAPWLARPATWRL
HCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LDVMVAVMMFSVAWQLIRSA
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]