| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047190
Identifier: 66047190
GI number: 66047190
Start: 4710590
End: 4711411
Strand: Direct
Name: 66047190
Synonym: Psyr_3963
Alternate gene names: NA
Gene position: 4710590-4711411 (Clockwise)
Preceding gene: 66047189
Following gene: 66047193
Centisome position: 77.3
GC content: 57.42
Gene sequence:
>822_bases ATGAGCAAGATGGCTGACGAGGTGCAGAGAAACTTGATCAAGGCCATCGACAGAGATGCCTTGTTTCTCCCCACCCTGCC GGAAGTGGCACTGAGAATTCGCCTGGCTGCAGAGGACACCGAGATCAGTATCTCGGCCCTGAGCAAGGTCATCGGTAGCG ATACAGCCCTTTCGGCACGCCTGATAAAGGTTGCGAACAGCCCCTTGCTGCGCCCGAACTTTGAAGTCAGCGACGTCAAT ACCGCGATTCGACGCCTGGGCGTCAACTACACCTGCAACCTGGCCATTGGTCTGGTGGTCGAGCAGATGTTCCACGCCAA ATCGCCGGTCATCGAACAGAAGATGCGCGATATCTGGAAGCAAAGCCTGCAGGTTGCCGGTATCAGCTACACCCTGTGTC AGCGCTACACCAATCTGAAACCTGATCAGGCCACGCTCGCCGGGCTGATCCACCTGATCGGGATTCTGCCGATCCTGACC TATGCCGAAGACCATTACGAGTTGCTGTCCGACCCGATCAGCCTCAACCACGTGATCGACAGCATTCATCCGGTCATCGG CGAGCGCCTGCTGCGCTCATGGGACTTCCCTGAACCGCTGGCCTGTGTGCCAGGCCAGTTCCAGAACTTCGCGCGCGTCT CGAAAAACCCGGACTACACCGATCTGGTACAGATCGCCACGGTGCATATCCACAGAAATACCGACCACCCCTTCAGCCTC ATTGAAATGGTCGACCTGCCTGCCTACAGCCAGTTGAGACTTGCCAGAGCCGAAGACGTGCTCAGCGCCCAGATGGACGA AGCCAAGAGCATGCTCTACTAG
Upstream 100 bases:
>100_bases CATTCAGCTTCCTAGTGTCTTTAGAGCGATCCAGTACAGCCTGGCGCTCTGAAGGGCGCGCGGATAACTCTGGACACCCC CAACAGCTGCGAGATGCAAC
Downstream 100 bases:
>100_bases CCTCGACCCATCAGGTGGCGCTGAAACTGACCCTTACCTTCAAGCCGCGCTCGGCGCCCTCGTGCAAGGTGATTCTGGCC AGATGTGCCCGGCAGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase; Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSKMADEVQRNLIKAIDRDALFLPTLPEVALRIRLAAEDTEISISALSKVIGSDTALSARLIKVANSPLLRPNFEVSDVN TAIRRLGVNYTCNLAIGLVVEQMFHAKSPVIEQKMRDIWKQSLQVAGISYTLCQRYTNLKPDQATLAGLIHLIGILPILT YAEDHYELLSDPISLNHVIDSIHPVIGERLLRSWDFPEPLACVPGQFQNFARVSKNPDYTDLVQIATVHIHRNTDHPFSL IEMVDLPAYSQLRLARAEDVLSAQMDEAKSMLY
Sequences:
>Translated_273_residues MSKMADEVQRNLIKAIDRDALFLPTLPEVALRIRLAAEDTEISISALSKVIGSDTALSARLIKVANSPLLRPNFEVSDVN TAIRRLGVNYTCNLAIGLVVEQMFHAKSPVIEQKMRDIWKQSLQVAGISYTLCQRYTNLKPDQATLAGLIHLIGILPILT YAEDHYELLSDPISLNHVIDSIHPVIGERLLRSWDFPEPLACVPGQFQNFARVSKNPDYTDLVQIATVHIHRNTDHPFSL IEMVDLPAYSQLRLARAEDVLSAQMDEAKSMLY >Mature_272_residues SKMADEVQRNLIKAIDRDALFLPTLPEVALRIRLAAEDTEISISALSKVIGSDTALSARLIKVANSPLLRPNFEVSDVNT AIRRLGVNYTCNLAIGLVVEQMFHAKSPVIEQKMRDIWKQSLQVAGISYTLCQRYTNLKPDQATLAGLIHLIGILPILTY AEDHYELLSDPISLNHVIDSIHPVIGERLLRSWDFPEPLACVPGQFQNFARVSKNPDYTDLVQIATVHIHRNTDHPFSLI EMVDLPAYSQLRLARAEDVLSAQMDEAKSMLY
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30596; Mature: 30465
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMADEVQRNLIKAIDRDALFLPTLPEVALRIRLAAEDTEISISALSKVIGSDTALSAR CCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHHHH LIKVANSPLLRPNFEVSDVNTAIRRLGVNYTCNLAIGLVVEQMFHAKSPVIEQKMRDIWK HHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH QSLQVAGISYTLCQRYTNLKPDQATLAGLIHLIGILPILTYAEDHYELLSDPISLNHVID HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SIHPVIGERLLRSWDFPEPLACVPGQFQNFARVSKNPDYTDLVQIATVHIHRNTDHPFSL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCHHH IEMVDLPAYSQLRLARAEDVLSAQMDEAKSMLY HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKMADEVQRNLIKAIDRDALFLPTLPEVALRIRLAAEDTEISISALSKVIGSDTALSAR CHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHEECCCCHHHHHHHHHHHCCCHHHHHH LIKVANSPLLRPNFEVSDVNTAIRRLGVNYTCNLAIGLVVEQMFHAKSPVIEQKMRDIWK HHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH QSLQVAGISYTLCQRYTNLKPDQATLAGLIHLIGILPILTYAEDHYELLSDPISLNHVID HHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SIHPVIGERLLRSWDFPEPLACVPGQFQNFARVSKNPDYTDLVQIATVHIHRNTDHPFSL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCHHH IEMVDLPAYSQLRLARAEDVLSAQMDEAKSMLY HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA