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The map label for this gene is recO [H]

Identifier: 66047176

GI number: 66047176

Start: 4697047

End: 4697730

Strand: Reverse

Name: recO [H]

Synonym: Psyr_3949

Alternate gene names: 66047176

Gene position: 4697730-4697047 (Counterclockwise)

Preceding gene: 66047177

Following gene: 66047175

Centisome position: 77.09

GC content: 63.89

Gene sequence:

>684_bases
ATGAGCACGCCCACCGGCCAACCTGCTTATGTGCTCCACAGTCGTGCGTATCGCGAAAACAGCGCGCTGGTCGACTTCCT
CACGCCTCAGGGCCGTCTGCGTGCCGTGCTGCGCAGTGCCAAGGGCAAGGCGGGTTCGCTGGCACGCCCGTTCGTGCCCC
TCGAGGTCGAGTTTCGAGGGCGGGGCGAGCTGAAGAATGTCGGCCGCATGGAAAGCGCGGGCGTCGCCACCTGGATGACC
GGCGAGGCGCTGTTCAGCGGCATGTACCTCAACGAACTGCTGATTCGCCTGTTGCCTGCCGAAGACCCTCATCCTGCGGT
GTTCGAACATTACGCTGCCACGCTGCTGGCCCTTGCTCTGGGGCGTCCGCTGGAGCCGTTGCTGCGTTCGTTCGAATGGC
GGTTGCTGGATGACCTGGGCTATGGCTTCGCGATGGACGCCGACATCAACGGCGAACCGCTGGCCATTGATGGCATGTAT
CGCCTGCAGGTCGATGCCGGGCTCGAGCGTGTGTACCTGCTTCAGCCCGGTCTGTTTCAGGGCGCGGAATTACTGGCCAT
GTCCGAAGCCGACTGGAGCGTCCCGGGCGCGTTGTCCGCTGCCAAGCGCCTGATGCGTCAGGCGCTGGCAGTTCACTTGG
GCGGTCGCCCTTTAGTCAGTCGTGAACTGTTTCGCAAGCCTTGA

Upstream 100 bases:

>100_bases
CGAGCGCGCCCTGCGTTCCCTTGGCTACGGCGACCTCTAAGCTGTCCTTTCGCCCGACCTTTCGGTGGTCGGGCGAACAC
TTCCCTCTCGAGCCAGCCTG

Downstream 100 bases:

>100_bases
TCAGGCTTTATTCTCTACAGCCTGCTTCGACCAGCTCGCCCATTTTTCTGGAGACCACCGTGACCCACAGCACTCGTATC
CTTCTCGGCGTGAACATCGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSTPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSAKGKAGSLARPFVPLEVEFRGRGELKNVGRMESAGVATWMT
GEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGRPLEPLLRSFEWRLLDDLGYGFAMDADINGEPLAIDGMY
RLQVDAGLERVYLLQPGLFQGAELLAMSEADWSVPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP

Sequences:

>Translated_227_residues
MSTPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSAKGKAGSLARPFVPLEVEFRGRGELKNVGRMESAGVATWMT
GEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGRPLEPLLRSFEWRLLDDLGYGFAMDADINGEPLAIDGMY
RLQVDAGLERVYLLQPGLFQGAELLAMSEADWSVPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
>Mature_226_residues
STPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSAKGKAGSLARPFVPLEVEFRGRGELKNVGRMESAGVATWMTG
EALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALALGRPLEPLLRSFEWRLLDDLGYGFAMDADINGEPLAIDGMYR
LQVDAGLERVYLLQPGLFQGAELLAMSEADWSVPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=227, Percent_Identity=39.2070484581498, Blast_Score=134, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 24958; Mature: 24827

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSAKGKAGSLARPFVPLEVEFRG
CCCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
RGELKNVGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALAL
CCCCHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
GRPLEPLLRSFEWRLLDDLGYGFAMDADINGEPLAIDGMYRLQVDAGLERVYLLQPGLFQ
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCEEEEEECCCCCEEEEECCCCCC
GAELLAMSEADWSVPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure 
STPTGQPAYVLHSRAYRENSALVDFLTPQGRLRAVLRSAKGKAGSLARPFVPLEVEFRG
CCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
RGELKNVGRMESAGVATWMTGEALFSGMYLNELLIRLLPAEDPHPAVFEHYAATLLALAL
CCCCHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
GRPLEPLLRSFEWRLLDDLGYGFAMDADINGEPLAIDGMYRLQVDAGLERVYLLQPGLFQ
CCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCEEEEEECCCCCEEEEECCCCCC
GAELLAMSEADWSVPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA