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The map label for this gene is rpmE2 [H]

Identifier: 66047147

GI number: 66047147

Start: 4663147

End: 4663428

Strand: Reverse

Name: rpmE2 [H]

Synonym: Psyr_3920

Alternate gene names: 66047147

Gene position: 4663428-4663147 (Counterclockwise)

Preceding gene: 66047150

Following gene: 66047146

Centisome position: 76.53

GC content: 58.87

Gene sequence:

>282_bases
ATGAAACCCGATATCCATCCTCAATACCGCACCGTGCTGTTCCACGACACCGCTGCCGACGCCTACTTTCTTATCGGCTC
GACCGTAGACACGGACCGCACGCAACAGCACACCGACGGCACTACCTATCCTTATGTTGCGCTCGACGTTTCCAGTGCCT
CGCACCCGATGTACACCGGGCAGCAGCGCAAGGCCACCACCGAAGGCCGGATCGCGGGTTTCAACAAGCGTTTCGCCACC
TTTGGCTCTGCTGGCAAGAAAGAAACCGCAGCCGCTCAATGA

Upstream 100 bases:

>100_bases
TTCGATCAACCTCACCAATGATGGCAATCAACAGCAGTCATTCTCATCTTGCGTTATGTTACTGTATAACTATTCCAGTC
AACTCACCGGAGAGATCACG

Downstream 100 bases:

>100_bases
GTGGTTTGACCTCCCGGTCTTGGGCATTTCGCATGGATTGCCCACGACCGGGATTTTTTTGTCTGAATTTCAGGCCAACG
GCCAATCATCTACTGGACTA

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKPDIHPQYRTVLFHDTAADAYFLIGSTVDTDRTQQHTDGTTYPYVALDVSSASHPMYTGQQRKATTEGRIAGFNKRFAT
FGSAGKKETAAAQ

Sequences:

>Translated_93_residues
MKPDIHPQYRTVLFHDTAADAYFLIGSTVDTDRTQQHTDGTTYPYVALDVSSASHPMYTGQQRKATTEGRIAGFNKRFAT
FGSAGKKETAAAQ
>Mature_93_residues
MKPDIHPQYRTVLFHDTAADAYFLIGSTVDTDRTQQHTDGTTYPYVALDVSSASHPMYTGQQRKATTEGRIAGFNKRFAT
FGSAGKKETAAAQ

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily [H]

Homologues:

Organism=Escherichia coli, GI2367109, Length=86, Percent_Identity=59.3023255813954, Blast_Score=110, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 10215; Mature: 10215

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDIHPQYRTVLFHDTAADAYFLIGSTVDTDRTQQHTDGTTYPYVALDVSSASHPMYTG
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
QQRKATTEGRIAGFNKRFATFGSAGKKETAAAQ
CCCCCCCCCCEECCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKPDIHPQYRTVLFHDTAADAYFLIGSTVDTDRTQQHTDGTTYPYVALDVSSASHPMYTG
CCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
QQRKATTEGRIAGFNKRFATFGSAGKKETAAAQ
CCCCCCCCCCEECCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]