| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gltK [H]
Identifier: 66047137
GI number: 66047137
Start: 4652944
End: 4653609
Strand: Direct
Name: gltK [H]
Synonym: Psyr_3910
Alternate gene names: 66047137
Gene position: 4652944-4653609 (Clockwise)
Preceding gene: 66047136
Following gene: 66047138
Centisome position: 76.36
GC content: 58.71
Gene sequence:
>666_bases ATGGACTTCACTGGAATCGTTCCGGCCATTCCCGGTCTGTGGAACGGCATGGTCATGACCCTCAAGCTGATGGCGATGGG TGTGGTCGGCGGCCTGGTGCTTGGCACGCTGCTGGCGTTGATGCGCCTGTCATCGAACAAGCTGCTGGCCAATGTGGCCG GCGCCTACGTGAACTACTTTCGTTCGATCCCGCTGCTGCTGGTGATCACCTGGTTCTATCTGGCCGTGCCGTTCGTGCTG CGCTGGATTACCGGTGAAGACACGCCCATCGGTGCGTTTGCCTCCTGCGTCGTGGCCTTCATGATGTTCGAAGCCGCGTA CTTCTGCGAAATCGTCCGTGCCGGTGTGCAGTCGATCTCCAAGGGACAAATGGGCGCCGCTCAGGCGCTGGGCATGAACT ACTCGCAGATGATGCGACTGATCATCCTGCCCCAGGCGTTTCGCAAGATGACCCCGCTGCTGCTGCAACAGAGCATCATT CTGTTTCAGGACACCTCTCTGGTGTACACCGTCGGCCTCGTCGATTTTCTCAACGCATCGCGCTCCAGTGGCGACATCAT CGGGCGCGCCAACGAGTTCCTGATCATTGCCGGTCTGGTGTATTTCACGATCAGCTTTGCCGCCTCGCTGCTGGTGAAGC GTCTGCAAAAAAGGTTTGCCGTATGA
Upstream 100 bases:
>100_bases GCTCATCTACTTCACGCTGAACATGAGCCTGATGCTGCTGATGCGTGCGATCGAGAAGAAAGTCGCCGTACCGGGACTCA TCTCACTGGGGGGCAAATAA
Downstream 100 bases:
>100_bases TTTCCATCAAAAACGTCAACAAGTGGTATGGGGACTTCCAGGTACTGACCGATTGCAGCACCGAGGTCAGCAAGGGCGAA GTGGTGGTGGTGTGCGGCCC
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MDFTGIVPAIPGLWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVPFVL RWITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSII LFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV
Sequences:
>Translated_221_residues MDFTGIVPAIPGLWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVPFVL RWITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSII LFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV >Mature_221_residues MDFTGIVPAIPGLWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVPFVL RWITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSII LFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=54.0909090909091, Blast_Score=218, Evalue=2e-58, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=33.4928229665072, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=33.6322869955157, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=30.188679245283, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788226, Length=217, Percent_Identity=33.6405529953917, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788645, Length=219, Percent_Identity=30.5936073059361, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=24.1706161137441, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=23.5023041474654, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48994930, Length=135, Percent_Identity=31.8518518518519, Blast_Score=70, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24199; Mature: 24199
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFTGIVPAIPGLWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSIS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNAS CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCC RSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFTGIVPAIPGLWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSIS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNAS CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCC RSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]