| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is nasC [H]
Identifier: 66047126
GI number: 66047126
Start: 4639221
End: 4641329
Strand: Reverse
Name: nasC [H]
Synonym: Psyr_3899
Alternate gene names: 66047126
Gene position: 4641329-4639221 (Counterclockwise)
Preceding gene: 66047127
Following gene: 66047125
Centisome position: 76.17
GC content: 61.69
Gene sequence:
>2109_bases ATGACCCGGACTGAACACTACCGAGCCTGCCACCTGTGCGAGGCCATTTGCGGTCTTGTGATCGAGACCGTCGTGGAGGC GGATTCTGCGCCGCGCATTGCCTCGATCAAGGGCGACCCGCTGGACACGTTCAGCCGCGGTCATATCTGCCCCAAGGCGA TTGCGTTGCAGGACATCCAGAATGACCCTGATCGTTTGCGCCAGCCGATGCTGCGCAGCGGTGATCAGTGGCAGCCGATT GCCTGGCAGCAGGCGTTCGATCTGGTGGCGGAGCGGCTTTACGCCATTCAGCAGCGCCATGGGCAGAACGCGGTAGCTGT CTATCAGGGCAACCCCAGCGTGCATAACTACGGGTTGATGACCCACAGCAATTACTTTCTCGGCCTGCTCAAGACCCGCA ATCGTTTTTCGGCGACGTCGGTCGATCAGTTGCCGCACCACCTCAGCAGTTTCCTGATGTATGGCCACGGCATGCTGTTG CCGATTCCGGATATCGATCACACCGACTTCATGCTGATTCTCGGCGGCAATCCGTTGGCGTCCAATGGCAGCATCATGAC GGTTCCGGATGTTGAAAAGCGTCTGAAAGCGATCCAGCAGCGCGGCGGCAAACTGGTGGTCATCGACCCGCGCCGCAGTG AGACGGCTGCCATCGCTGACCAGCATCTGTTCGTACGTCCGGGCGGTGACGCAGCGTTGCTGTTCGGGCTGCTCAATACG CTGTTCGAAGAGGGGCTGACCCGCGAGAGCCATTTGCCTGTCGACGGCCTGGAGCAGGTTCGCCAGGCCATTGCCGGCTT CACTGCAGAGGCCATGAGCCCGCGCTGCGGTATCGCCGCCGAGCAGATCCGGCAACTGGCACGGGATTTCGCGGCCGCTG ACAAGGCGGTGTGTTATGGGCGAATGGGCGTGTCGACTCAGACCTTTGGCACGCTGTGTCATTGGCTGGCACAACTGATC AATCTGGTGACGGGCAACCTGGACCGTGTGGGTGGCGCACTCTGTACGGAGCCCGCCGTCGACCTCGTCAGCTCGACATC CGGCGGTCATTTCAATCGGTGGCAAAGCAGGGTGTCCGGCCTGCCAGAGTATGGCGGCGAGTTGCCGGTTTCGGCGCTGG CCGAGGAAATGCTTGTGGACGGGGAAGGGCAGGTTCGCGCGTTGGTGACCGTTGCGGGTAACCCGGTTCTGTCGACGCCC AACGGCCGTCAGCTGGAGCAGGCGCTCGAAGGGCTTGAGTTCATGCTCAGCATCGATCTTTACATCAACGAGACCACTCG CCACGCCGACTTGATCCTGCCGTCCACCTCGGCACTGGAAAATGATCACTACGACACCACCTTCAACACGCTCGCAGTGC GCAACGTCACGCGCTTCAATCGGGCCATTTTCGACAAGCCCGAAGGTGCCCTGCACGACTGGGAGATCTTCGTCGGGCTG GCCAGCGCCTTTGCTGCCAAGGCCGAGCGAGCGCTGAAACCCACGTTGCCGCCTGCGCAGATGATCGATCGCGGGCTGCG TGCAGGCCTCTATGGCGATGCATCGTCCCATAAGCTGTCACTGGAAACCTTGGACAGTCATCCGCACGGCCTCGATCTGG GGGCGTTGAAGGCCAATCTTGCACAGCGCCTGAAGACCGCCAATGGCCGCATTCAGGCCGCGCCTGAGGTGATCATGGCC GACCTGGCGCGCTTTGCAGCCGATCCTTCTCCTCAGGCAAGCGAGTTGCTGCTGATTGGCCGCAGGCATGTGCGCAGTAA CAATTCATGGATGCACAACTACCATCGGCTGGTGAAGGGCAAACCCAGGCATCAACTGTTGATGCATCCTGACGATCTCG CGTGCCGTGGTCTGAGTGACGGCCAGCAGGTCCGGGTCAGCTCCCGGGTCGGGATGATCGAGGTTCAGGTGCTGGGCAGT CTGGACATGATGCGCGGGGTGGTCAGCCTGCCGCACGGTTGGGGGCATTCGCGTTCAGGGGTAAAAATGGCGATCGCGCA GAGCCTGCCCGGCGTCAGTGCCAATGACCTGACCGACGAACGGCAACTCGACGTGCTGTCCGGCAACGCGGCGTTGAACG GCGTACCGGTGCAGGTCGTGGCGTGTTAA
Upstream 100 bases:
>100_bases TCGATTCACGGGCCGAACATCAGTGGCGCGGGGCATGAGCAGACAGCATAGTGAGTGTTCGGCAATCAACCGGATTGCCA TGACACGATCTGAGGCTGTG
Downstream 100 bases:
>100_bases GCCTCAAGACAGAGCGTCATGCTCGGGATTTCGTTACAATGTGTCACCGTGCCGACAACTGAGTCGGATATTTCAGCCGA GGTGCTCCATGGATATCATC
Product: molybdopterin oxidoreductase:molydopterin dinucleotide-binding region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 701
Protein sequence:
>702_residues MTRTEHYRACHLCEAICGLVIETVVEADSAPRIASIKGDPLDTFSRGHICPKAIALQDIQNDPDRLRQPMLRSGDQWQPI AWQQAFDLVAERLYAIQQRHGQNAVAVYQGNPSVHNYGLMTHSNYFLGLLKTRNRFSATSVDQLPHHLSSFLMYGHGMLL PIPDIDHTDFMLILGGNPLASNGSIMTVPDVEKRLKAIQQRGGKLVVIDPRRSETAAIADQHLFVRPGGDAALLFGLLNT LFEEGLTRESHLPVDGLEQVRQAIAGFTAEAMSPRCGIAAEQIRQLARDFAAADKAVCYGRMGVSTQTFGTLCHWLAQLI NLVTGNLDRVGGALCTEPAVDLVSSTSGGHFNRWQSRVSGLPEYGGELPVSALAEEMLVDGEGQVRALVTVAGNPVLSTP NGRQLEQALEGLEFMLSIDLYINETTRHADLILPSTSALENDHYDTTFNTLAVRNVTRFNRAIFDKPEGALHDWEIFVGL ASAFAAKAERALKPTLPPAQMIDRGLRAGLYGDASSHKLSLETLDSHPHGLDLGALKANLAQRLKTANGRIQAAPEVIMA DLARFAADPSPQASELLLIGRRHVRSNNSWMHNYHRLVKGKPRHQLLMHPDDLACRGLSDGQQVRVSSRVGMIEVQVLGS LDMMRGVVSLPHGWGHSRSGVKMAIAQSLPGVSANDLTDERQLDVLSGNAALNGVPVQVVAC
Sequences:
>Translated_702_residues MTRTEHYRACHLCEAICGLVIETVVEADSAPRIASIKGDPLDTFSRGHICPKAIALQDIQNDPDRLRQPMLRSGDQWQPI AWQQAFDLVAERLYAIQQRHGQNAVAVYQGNPSVHNYGLMTHSNYFLGLLKTRNRFSATSVDQLPHHLSSFLMYGHGMLL PIPDIDHTDFMLILGGNPLASNGSIMTVPDVEKRLKAIQQRGGKLVVIDPRRSETAAIADQHLFVRPGGDAALLFGLLNT LFEEGLTRESHLPVDGLEQVRQAIAGFTAEAMSPRCGIAAEQIRQLARDFAAADKAVCYGRMGVSTQTFGTLCHWLAQLI NLVTGNLDRVGGALCTEPAVDLVSSTSGGHFNRWQSRVSGLPEYGGELPVSALAEEMLVDGEGQVRALVTVAGNPVLSTP NGRQLEQALEGLEFMLSIDLYINETTRHADLILPSTSALENDHYDTTFNTLAVRNVTRFNRAIFDKPEGALHDWEIFVGL ASAFAAKAERALKPTLPPAQMIDRGLRAGLYGDASSHKLSLETLDSHPHGLDLGALKANLAQRLKTANGRIQAAPEVIMA DLARFAADPSPQASELLLIGRRHVRSNNSWMHNYHRLVKGKPRHQLLMHPDDLACRGLSDGQQVRVSSRVGMIEVQVLGS LDMMRGVVSLPHGWGHSRSGVKMAIAQSLPGVSANDLTDERQLDVLSGNAALNGVPVQVVAC >Mature_701_residues TRTEHYRACHLCEAICGLVIETVVEADSAPRIASIKGDPLDTFSRGHICPKAIALQDIQNDPDRLRQPMLRSGDQWQPIA WQQAFDLVAERLYAIQQRHGQNAVAVYQGNPSVHNYGLMTHSNYFLGLLKTRNRFSATSVDQLPHHLSSFLMYGHGMLLP IPDIDHTDFMLILGGNPLASNGSIMTVPDVEKRLKAIQQRGGKLVVIDPRRSETAAIADQHLFVRPGGDAALLFGLLNTL FEEGLTRESHLPVDGLEQVRQAIAGFTAEAMSPRCGIAAEQIRQLARDFAAADKAVCYGRMGVSTQTFGTLCHWLAQLIN LVTGNLDRVGGALCTEPAVDLVSSTSGGHFNRWQSRVSGLPEYGGELPVSALAEEMLVDGEGQVRALVTVAGNPVLSTPN GRQLEQALEGLEFMLSIDLYINETTRHADLILPSTSALENDHYDTTFNTLAVRNVTRFNRAIFDKPEGALHDWEIFVGLA SAFAAKAERALKPTLPPAQMIDRGLRAGLYGDASSHKLSLETLDSHPHGLDLGALKANLAQRLKTANGRIQAAPEVIMAD LARFAADPSPQASELLLIGRRHVRSNNSWMHNYHRLVKGKPRHQLLMHPDDLACRGLSDGQQVRVSSRVGMIEVQVLGSL DMMRGVVSLPHGWGHSRSGVKMAIAQSLPGVSANDLTDERQLDVLSGNAALNGVPVQVVAC
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868721, Length=506, Percent_Identity=27.6679841897233, Blast_Score=159, Evalue=5e-40, Organism=Escherichia coli, GI1787870, Length=733, Percent_Identity=22.7830832196453, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI3868720, Length=269, Percent_Identity=29.7397769516729, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI3868719, Length=252, Percent_Identity=28.1746031746032, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI171474008, Length=359, Percent_Identity=26.1838440111421, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1787778, Length=480, Percent_Identity=25.625, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI87081994, Length=725, Percent_Identity=20.551724137931, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 76464; Mature: 76333
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTEHYRACHLCEAICGLVIETVVEADSAPRIASIKGDPLDTFSRGHICPKAIALQDIQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHC NDPDRLRQPMLRSGDQWQPIAWQQAFDLVAERLYAIQQRHGQNAVAVYQGNPSVHNYGLM CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECEEE THSNYFLGLLKTRNRFSATSVDQLPHHLSSFLMYGHGMLLPIPDIDHTDFMLILGGNPLA ECCCHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCC SNGSIMTVPDVEKRLKAIQQRGGKLVVIDPRRSETAAIADQHLFVRPGGDAALLFGLLNT CCCCEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCEEEEECCCCHHHHHHHHHH LFEEGLTRESHLPVDGLEQVRQAIAGFTAEAMSPRCGIAAEQIRQLARDFAAADKAVCYG HHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEC RMGVSTQTFGTLCHWLAQLINLVTGNLDRVGGALCTEPAVDLVSSTSGGHFNRWQSRVSG CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCHHHHHHHCCCCCCHHHHHHHHCC LPEYGGELPVSALAEEMLVDGEGQVRALVTVAGNPVLSTPNGRQLEQALEGLEFMLSIDL CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHHEEEEEEE YINETTRHADLILPSTSALENDHYDTTFNTLAVRNVTRFNRAIFDKPEGALHDWEIFVGL EEECCCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ASAFAAKAERALKPTLPPAQMIDRGLRAGLYGDASSHKLSLETLDSHPHGLDLGALKANL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH AQRLKTANGRIQAAPEVIMADLARFAADPSPQASELLLIGRRHVRSNNSWMHNYHRLVKG HHHHHHCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC KPRHQLLMHPDDLACRGLSDGQQVRVSSRVGMIEVQVLGSLDMMRGVVSLPHGWGHSRSG CCCCCEEECCCCHHHCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC VKMAIAQSLPGVSANDLTDERQLDVLSGNAALNGVPVQVVAC CEEHHHHHCCCCCCCCCCCCHHEEEEECCCEECCCCEEEEEC >Mature Secondary Structure TRTEHYRACHLCEAICGLVIETVVEADSAPRIASIKGDPLDTFSRGHICPKAIALQDIQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHC NDPDRLRQPMLRSGDQWQPIAWQQAFDLVAERLYAIQQRHGQNAVAVYQGNPSVHNYGLM CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECEEE THSNYFLGLLKTRNRFSATSVDQLPHHLSSFLMYGHGMLLPIPDIDHTDFMLILGGNPLA ECCCHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCC SNGSIMTVPDVEKRLKAIQQRGGKLVVIDPRRSETAAIADQHLFVRPGGDAALLFGLLNT CCCCEEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCEEEEECCCCHHHHHHHHHH LFEEGLTRESHLPVDGLEQVRQAIAGFTAEAMSPRCGIAAEQIRQLARDFAAADKAVCYG HHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEC RMGVSTQTFGTLCHWLAQLINLVTGNLDRVGGALCTEPAVDLVSSTSGGHFNRWQSRVSG CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCHHHHHHHCCCCCCHHHHHHHHCC LPEYGGELPVSALAEEMLVDGEGQVRALVTVAGNPVLSTPNGRQLEQALEGLEFMLSIDL CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHHEEEEEEE YINETTRHADLILPSTSALENDHYDTTFNTLAVRNVTRFNRAIFDKPEGALHDWEIFVGL EEECCCCCCEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ASAFAAKAERALKPTLPPAQMIDRGLRAGLYGDASSHKLSLETLDSHPHGLDLGALKANL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHH AQRLKTANGRIQAAPEVIMADLARFAADPSPQASELLLIGRRHVRSNNSWMHNYHRLVKG HHHHHHCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCC KPRHQLLMHPDDLACRGLSDGQQVRVSSRVGMIEVQVLGSLDMMRGVVSLPHGWGHSRSG CCCCCEEECCCCHHHCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC VKMAIAQSLPGVSANDLTDERQLDVLSGNAALNGVPVQVVAC CEEHHHHHCCCCCCCCCCCCHHEEEEECCCEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 7868621 [H]