| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047055
Identifier: 66047055
GI number: 66047055
Start: 4557364
End: 4558491
Strand: Reverse
Name: 66047055
Synonym: Psyr_3828
Alternate gene names: NA
Gene position: 4558491-4557364 (Counterclockwise)
Preceding gene: 66047056
Following gene: 66047051
Centisome position: 74.81
GC content: 61.52
Gene sequence:
>1128_bases ATGCCTGTTCACGTAATCGACAGCCTCGCCACCGTTGCGCCTGCCCAGTGGGATGCGCTGGTACCTGGCAATCAGCCATT CCTGCGGCATGCGTTTCTCAGCTCGCTGGAGGACAGCGGCAGTCTCGGGCCACGATCGGGCTGGCGTGCCGAACATGTGC TGCACTACGAAAACGATCAGTTGGTGGCGGCATTGCCAGCCTACCGAAAGTGGCATTCGTATGGCGAGTACGTGTTCGAT CACGCCTGGGCAGACGCCTGCCGTCGCGCCGGCATCGCCTATTACCCCAAGCTGCTGATCGCCGTGCCGTTCAGCCCGGT CGGCGGTTCGCGGATTCTGTCCGCGACGCCTCAGGGTGGCATCGAGTTGCTCGGCGAGCTGCCGGCATACCTGCAACGTG AGGGGCTGTCGAGCGCACACGTGAACTTTACCGATCCGGCGGCCGATGCCTTGCTTGAAACCCAGCCGGGCTGGTTGCAG CGCATCGGTTGCCAGTTTCACTGGCATAACCGGGGTTACCGGGACTTTCAGGACTTTCTTGACGCATTGAGTTCACGCAA GCGCAAACAGATGCGCAAGGAACGTGAACAAGTGGCGGGGCAGGGCATCGAGTTTGAATGGCTCGAGGGCGCGCAGATGA GCGAAGTGCTGTGGGACTTCGTTTATGCGTGCTACTCCAATACCTACGAGGTGCGTGGGCAGGCGCCTTACCTGACGCGT GAGTTCTTCAGCCTGTTGGCCGAGCGCATGCCCGAATCGATCCGTGTGGTCATCGCGCTGCAGGGCTCACGGCCTGTGGC GATGGCCTTCAGCCTGATTGGCGATGACAGTTTCTATGGGCGCTACTGGGGCTGCCTGGCCGAGTTTGACCGGCTGCATT TCGAAACCTGTTTCTATCAAGGTATGGACTATGCCATCGCCCACGGCCTGCAACGATTCGACGCCGGCGCGCAGGGCGAA CACAAACTGATCCGCGGCTTCGAACCGCAGATCACCCGTTCGTGGCACTACCTGATGCACCCAGGCCTGAAAGACGCGGT CAGCGAGTTTCTGGAGCAGGAGCGAGTCGGCGTACTGGCCTATGCCGAGGAAGCGCGCAGCGCGCTGCCGTATCGGCAGG CGGAGTAA
Upstream 100 bases:
>100_bases TGATTTCGCGATCACTCTTTCCAGGCAGATTGCCGAGGCGGTGAACATGACGCCTCAATAAGGGATATTCTTCACCCTGT CAGCCTATCGGGGAACCTGC
Downstream 100 bases:
>100_bases CCGGCCAGAAGACATTCAGCGACTGCACGGGCCTCTTCGCGAGCAAGCTCGCTCCCACAAGTGCGGTGTACACCTGACCG ACAGGTGAGTAGCTACCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MPVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQLVAALPAYRKWHSYGEYVFD HAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGGIELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQ RIGCQFHWHNRGYRDFQDFLDALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIAHGLQRFDAGAQGE HKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLAYAEEARSALPYRQAE
Sequences:
>Translated_375_residues MPVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQLVAALPAYRKWHSYGEYVFD HAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGGIELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQ RIGCQFHWHNRGYRDFQDFLDALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIAHGLQRFDAGAQGE HKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLAYAEEARSALPYRQAE >Mature_374_residues PVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQLVAALPAYRKWHSYGEYVFDH AWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGGIELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQR IGCQFHWHNRGYRDFQDFLDALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTRE FFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIAHGLQRFDAGAQGEH KLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLAYAEEARSALPYRQAE
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42620; Mature: 42489
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQ CCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC LVAALPAYRKWHSYGEYVFDHAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCEEECCCCHH IELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQRIGCQFHWHNRGYRDFQDFL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHH DALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHH EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQ HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GMDYAIAHGLQRFDAGAQGEHKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLA CCHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHCHHHHHCCCHHHHHHHHHHHHCCCHHE YAEEARSALPYRQAE EHHHHHHCCCCCCCC >Mature Secondary Structure PVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQ CCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC LVAALPAYRKWHSYGEYVFDHAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCEEECCCCHH IELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQRIGCQFHWHNRGYRDFQDFL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHH DALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHH EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQ HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GMDYAIAHGLQRFDAGAQGEHKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLA CCHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHCHHHHHCCCHHHHHHHHHHHHCCCHHE YAEEARSALPYRQAE EHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA