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The map label for this gene is yliI [H]

Identifier: 66046999

GI number: 66046999

Start: 4490038

End: 4491201

Strand: Reverse

Name: yliI [H]

Synonym: Psyr_3771

Alternate gene names: 66046999

Gene position: 4491201-4490038 (Counterclockwise)

Preceding gene: 66047000

Following gene: 66046997

Centisome position: 73.7

GC content: 58.33

Gene sequence:

>1164_bases
ATGCTTAGAAAAAACCTGATCGCGACATTGTGTACTGCAGCCATTCTGAGCCTGCCACTGACGGCCAGCGCCGCTACGGA
AACCTACAAAAGCGAACTGGGCACCGTCACGGTGACCCCTGTTGTCGAAGGTCTGGATCATCCGTGGGCGCTGGCCTTTC
TGCCTGACAGGCAAGGCATGCTGGTGACAGAGCGTTCGGGCAACCTGCGCGTGGTATCGGCGGATGGCAAATTGTCCGCA
CCGCTTTCCGGTGTCCCGCAAGTCTGGGCGCAGAAGCAGGGCGGTCTGCTTGATGTGGTGCTGTCACCGGACTTCGCCAA
GGACCGCATGGTGTATCTGACCTACTCCGAGGGCAGCGGCAAGACCGCCGCCGAAGGTGATACCGCCGGCACTGCCGCAG
GGCGTGGTCGTCTGTCCAAGGACATGACTCGTCTGGAAGACTTCGAAGTCATCTTCCGCCAGGAACCGAAACTGTCGGTG
GGCAACCACTTCGGCGCGCGGATGGTCTTCGATCGCGACGGTTACCTGTTCATCGCCCTGGGCGAAAACAATCAGCGCCC
CACGGCGCAGGATCTGGACAAGCTGCAGGGCAAGATCGTGCGCATCTATCCGGACGGCAGCGTACCGAAAGACAATCCGT
TCGTGGGCCAGAAGGGCGTTCGCCCCGAGATATGGTCCTATGGCCATCGCAATCAGCAGGGCGCCGCGCTCGACCCCTGG
ACCGGGACGTTGTGGACCAACGAGCATGGCCCCAAGGGCGGTGATGAGCTGAATATCATCGAGCGTGGCGCGAATTACGG
CTGGCCGATCGCGACCCACGGTATCGACTACTCGGGTCAGCCGATTTCGGAGTCGAAGGGCAAGGTTGTCGAAGGAACCA
AAATTCCGTTCCAGGTCTGGGAAGTGTCACCGGGCCTCAGTGGCATGGCGTTCTATGATCACAGCCTTTTCAAGGCATGG
GATCACAGTGTATTCATTGGTGCGCTGGCCACTGAAGAGTTGATCAGACTGCAGTTCGAAAATGACAAGATCGTTCATGA
AGAACGTCTGTTGAAAGACATGAAACAGCGCATACGTGATGTGCGTCAGGGGCCGGACGGTTACTTGTATCTGTTGACCG
ACGACGATAAGGGAAGTCTTCTGAAAGTAGGCTTGGCCCAGTAA

Upstream 100 bases:

>100_bases
CCACGTCCTTCTACACCGATAACCGACCCCAAGCGCGGCAACTGAATTTTCAACCCGGCGAACCCGTGTGGACGTCGACT
CAATGCATAAGGAAACGCTC

Downstream 100 bases:

>100_bases
TAAACTGTTAATCGCTTGAAAAAGAAAATTCCCACAATATTGTGGGAATTTTCTTATGAGTTGCTTGCGGTGGTAGCCGG
TAAAGCAGTCGGATCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLRKNLIATLCTAAILSLPLTASAATETYKSELGTVTVTPVVEGLDHPWALAFLPDRQGMLVTERSGNLRVVSADGKLSA
PLSGVPQVWAQKQGGLLDVVLSPDFAKDRMVYLTYSEGSGKTAAEGDTAGTAAGRGRLSKDMTRLEDFEVIFRQEPKLSV
GNHFGARMVFDRDGYLFIALGENNQRPTAQDLDKLQGKIVRIYPDGSVPKDNPFVGQKGVRPEIWSYGHRNQQGAALDPW
TGTLWTNEHGPKGGDELNIIERGANYGWPIATHGIDYSGQPISESKGKVVEGTKIPFQVWEVSPGLSGMAFYDHSLFKAW
DHSVFIGALATEELIRLQFENDKIVHEERLLKDMKQRIRDVRQGPDGYLYLLTDDDKGSLLKVGLAQ

Sequences:

>Translated_387_residues
MLRKNLIATLCTAAILSLPLTASAATETYKSELGTVTVTPVVEGLDHPWALAFLPDRQGMLVTERSGNLRVVSADGKLSA
PLSGVPQVWAQKQGGLLDVVLSPDFAKDRMVYLTYSEGSGKTAAEGDTAGTAAGRGRLSKDMTRLEDFEVIFRQEPKLSV
GNHFGARMVFDRDGYLFIALGENNQRPTAQDLDKLQGKIVRIYPDGSVPKDNPFVGQKGVRPEIWSYGHRNQQGAALDPW
TGTLWTNEHGPKGGDELNIIERGANYGWPIATHGIDYSGQPISESKGKVVEGTKIPFQVWEVSPGLSGMAFYDHSLFKAW
DHSVFIGALATEELIRLQFENDKIVHEERLLKDMKQRIRDVRQGPDGYLYLLTDDDKGSLLKVGLAQ
>Mature_387_residues
MLRKNLIATLCTAAILSLPLTASAATETYKSELGTVTVTPVVEGLDHPWALAFLPDRQGMLVTERSGNLRVVSADGKLSA
PLSGVPQVWAQKQGGLLDVVLSPDFAKDRMVYLTYSEGSGKTAAEGDTAGTAAGRGRLSKDMTRLEDFEVIFRQEPKLSV
GNHFGARMVFDRDGYLFIALGENNQRPTAQDLDKLQGKIVRIYPDGSVPKDNPFVGQKGVRPEIWSYGHRNQQGAALDPW
TGTLWTNEHGPKGGDELNIIERGANYGWPIATHGIDYSGQPISESKGKVVEGTKIPFQVWEVSPGLSGMAFYDHSLFKAW
DHSVFIGALATEELIRLQFENDKIVHEERLLKDMKQRIRDVRQGPDGYLYLLTDDDKGSLLKVGLAQ

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI124248546, Length=262, Percent_Identity=28.2442748091603, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI187936953, Length=264, Percent_Identity=28.030303030303, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI187936955, Length=264, Percent_Identity=28.030303030303, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1787060, Length=349, Percent_Identity=59.5988538681948, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42539; Mature: 42539

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKNLIATLCTAAILSLPLTASAATETYKSELGTVTVTPVVEGLDHPWALAFLPDRQGM
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEHHHHCCCCCEEEEEECCCCCE
LVTERSGNLRVVSADGKLSAPLSGVPQVWAQKQGGLLDVVLSPDFAKDRMVYLTYSEGSG
EEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCC
KTAAEGDTAGTAAGRGRLSKDMTRLEDFEVIFRQEPKLSVGNHFGARMVFDRDGYLFIAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCCEEEEEE
GENNQRPTAQDLDKLQGKIVRIYPDGSVPKDNPFVGQKGVRPEIWSYGHRNQQGAALDPW
CCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCC
TGTLWTNEHGPKGGDELNIIERGANYGWPIATHGIDYSGQPISESKGKVVEGTKIPFQVW
CCEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCEEEE
EVSPGLSGMAFYDHSLFKAWDHSVFIGALATEELIRLQFENDKIVHEERLLKDMKQRIRD
EECCCCCCEEEHHHHHHHHCCCCEEEEEHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHH
VRQGPDGYLYLLTDDDKGSLLKVGLAQ
HHCCCCCEEEEEEECCCCCEEEEECCC
>Mature Secondary Structure
MLRKNLIATLCTAAILSLPLTASAATETYKSELGTVTVTPVVEGLDHPWALAFLPDRQGM
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEHHHHCCCCCEEEEEECCCCCE
LVTERSGNLRVVSADGKLSAPLSGVPQVWAQKQGGLLDVVLSPDFAKDRMVYLTYSEGSG
EEEECCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCC
KTAAEGDTAGTAAGRGRLSKDMTRLEDFEVIFRQEPKLSVGNHFGARMVFDRDGYLFIAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEECCCEEEEEE
GENNQRPTAQDLDKLQGKIVRIYPDGSVPKDNPFVGQKGVRPEIWSYGHRNQQGAALDPW
CCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEECCC
TGTLWTNEHGPKGGDELNIIERGANYGWPIATHGIDYSGQPISESKGKVVEGTKIPFQVW
CCEEECCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCEEEE
EVSPGLSGMAFYDHSLFKAWDHSVFIGALATEELIRLQFENDKIVHEERLLKDMKQRIRD
EECCCCCCEEEHHHHHHHHCCCCEEEEEHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHH
VRQGPDGYLYLLTDDDKGSLLKVGLAQ
HHCCCCCEEEEEEECCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]