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The map label for this gene is adrA [H]

Identifier: 66046991

GI number: 66046991

Start: 4481276

End: 4482352

Strand: Direct

Name: adrA [H]

Synonym: Psyr_3763

Alternate gene names: 66046991

Gene position: 4481276-4482352 (Clockwise)

Preceding gene: 66046990

Following gene: 66046998

Centisome position: 73.54

GC content: 58.12

Gene sequence:

>1077_bases
ATGAGCACCTATCACCGCCGAGGGATGGCATTCGCCAAGCGGATCTACGCCCCGAGATGCTTCGGTGTCAGCGTTGGCTT
TGTGACGGTCGCTGTTTCTTTGTATTACGTGAACACAGCACACTGGGCGTGGTTGTTGGCACTGCTCTACAGTCTGGTAT
GGCCACATGTTGCTTATCAGCTCGCAAGAACGTCACGCGAGCCCTACCAGGCTGAATGGCGCAATCTGCTGTTCGATTCG
ATGATGGGCGGTTTCTGGATTGGCGCGATGGGTTTCAGCGCCGTTCCCGGGGTCACGGTCCTCGCCATGATGGCCATGCA
TAACATGGCCGCCGCCGGGCCACGGCTGATGCTGCAAGGCCTGTGCATGCAGGCACTGGGCGTGCTGATTTCGCTGGCCG
CGCTCGACCCTGTCGTCAATCTGCATGGCAACATGGCGCAGATCTACGCCTGCCTTCCGGTACTGGTGACCTACCCTATC
TTCATTGGCTGGCTGAGCCATCAGGTCACACTCAAGCTATGGGAACACCGCAACATCCTGCGCAAGGTCAGCCGCACCGA
CAGCCTCACCGGCCTGCTCAATCATGGTGCGTGGAAGGACCTGCTTGATCTGGAGTACGCCAGTAGCCAGAACGCGTATC
AGGAGTGCGTCATCGCGCTGATCGATATCGATCACTTCAAGGTCATCAACGACACTTATGGCCACCTGATGGGCGACACG
GTGCTGCAGAGTATCAGCGAAGCACTGATCGAAAACCTGCGTGATTCCGACCTGATCGGGCGTTGTGGCGGCGATGAGTT
CTGCGTCATTCTGCCCGACACCAGCTTGCTTCAGGCAAAGGAAATCCTCGAGCGCCTGCGTCTGGCGATAGATGAAATGA
CCTATACCCTGCATTGCGATCTCAAGGTCAGTCTCAGTATCGGTATTGCCGCCTATTCTCCTGAAATGCCGGATGCCTCG
TCGTGGCTGCATGAAGCAGACAAGGCGCTGTATCTGGCCAAAAGCACAGGCCGCAACCGCGTCGCCAGCCCTCAGGATGC
GCCGCCAGAACTCCAGTCGCTTGGCGCACAGGCCTGA

Upstream 100 bases:

>100_bases
AATACTCTTCCCTTGCCACTAGTGAACGCTCAAACTCCAGCCTTTCGGTCACGCGGCGTCGATTTCCGACCGATTCGAAA
GTAATGTCCGGTAAGAATCT

Downstream 100 bases:

>100_bases
CCTGTCAACGCCTGTCCTTGAACAGCATGTCGAACAGGGATGAGAGACTCTTGACCCCCATCGCTTTCAGGAACGTCTCG
CGCATGTCGTTACGCAGGCT

Product: GGDEF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSTYHRRGMAFAKRIYAPRCFGVSVGFVTVAVSLYYVNTAHWAWLLALLYSLVWPHVAYQLARTSREPYQAEWRNLLFDS
MMGGFWIGAMGFSAVPGVTVLAMMAMHNMAAAGPRLMLQGLCMQALGVLISLAALDPVVNLHGNMAQIYACLPVLVTYPI
FIGWLSHQVTLKLWEHRNILRKVSRTDSLTGLLNHGAWKDLLDLEYASSQNAYQECVIALIDIDHFKVINDTYGHLMGDT
VLQSISEALIENLRDSDLIGRCGGDEFCVILPDTSLLQAKEILERLRLAIDEMTYTLHCDLKVSLSIGIAAYSPEMPDAS
SWLHEADKALYLAKSTGRNRVASPQDAPPELQSLGAQA

Sequences:

>Translated_358_residues
MSTYHRRGMAFAKRIYAPRCFGVSVGFVTVAVSLYYVNTAHWAWLLALLYSLVWPHVAYQLARTSREPYQAEWRNLLFDS
MMGGFWIGAMGFSAVPGVTVLAMMAMHNMAAAGPRLMLQGLCMQALGVLISLAALDPVVNLHGNMAQIYACLPVLVTYPI
FIGWLSHQVTLKLWEHRNILRKVSRTDSLTGLLNHGAWKDLLDLEYASSQNAYQECVIALIDIDHFKVINDTYGHLMGDT
VLQSISEALIENLRDSDLIGRCGGDEFCVILPDTSLLQAKEILERLRLAIDEMTYTLHCDLKVSLSIGIAAYSPEMPDAS
SWLHEADKALYLAKSTGRNRVASPQDAPPELQSLGAQA
>Mature_357_residues
STYHRRGMAFAKRIYAPRCFGVSVGFVTVAVSLYYVNTAHWAWLLALLYSLVWPHVAYQLARTSREPYQAEWRNLLFDSM
MGGFWIGAMGFSAVPGVTVLAMMAMHNMAAAGPRLMLQGLCMQALGVLISLAALDPVVNLHGNMAQIYACLPVLVTYPIF
IGWLSHQVTLKLWEHRNILRKVSRTDSLTGLLNHGAWKDLLDLEYASSQNAYQECVIALIDIDHFKVINDTYGHLMGDTV
LQSISEALIENLRDSDLIGRCGGDEFCVILPDTSLLQAKEILERLRLAIDEMTYTLHCDLKVSLSIGIAAYSPEMPDASS
WLHEADKALYLAKSTGRNRVASPQDAPPELQSLGAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=339, Percent_Identity=34.8082595870207, Blast_Score=241, Evalue=7e-65,
Organism=Escherichia coli, GI145693134, Length=171, Percent_Identity=37.4269005847953, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI87082007, Length=264, Percent_Identity=32.1969696969697, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787262, Length=169, Percent_Identity=34.9112426035503, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788381, Length=179, Percent_Identity=32.4022346368715, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787541, Length=172, Percent_Identity=36.046511627907, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081977, Length=171, Percent_Identity=36.2573099415205, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87081881, Length=162, Percent_Identity=33.9506172839506, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787802, Length=200, Percent_Identity=28.5, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787816, Length=311, Percent_Identity=28.2958199356913, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788085, Length=173, Percent_Identity=30.0578034682081, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1787056, Length=157, Percent_Identity=33.1210191082803, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081974, Length=172, Percent_Identity=30.2325581395349, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1788956, Length=152, Percent_Identity=33.5526315789474, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 39736; Mature: 39604

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYHRRGMAFAKRIYAPRCFGVSVGFVTVAVSLYYVNTAHWAWLLALLYSLVWPHVAYQ
CCCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARTSREPYQAEWRNLLFDSMMGGFWIGAMGFSAVPGVTVLAMMAMHNMAAAGPRLMLQG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
LCMQALGVLISLAALDPVVNLHGNMAQIYACLPVLVTYPIFIGWLSHQVTLKLWEHRNIL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVSRTDSLTGLLNHGAWKDLLDLEYASSQNAYQECVIALIDIDHFKVINDTYGHLMGDT
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLQSISEALIENLRDSDLIGRCGGDEFCVILPDTSLLQAKEILERLRLAIDEMTYTLHCD
HHHHHHHHHHHHCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEE
LKVSLSIGIAAYSPEMPDASSWLHEADKALYLAKSTGRNRVASPQDAPPELQSLGAQA
EEEEEEEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
STYHRRGMAFAKRIYAPRCFGVSVGFVTVAVSLYYVNTAHWAWLLALLYSLVWPHVAYQ
CCHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARTSREPYQAEWRNLLFDSMMGGFWIGAMGFSAVPGVTVLAMMAMHNMAAAGPRLMLQG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
LCMQALGVLISLAALDPVVNLHGNMAQIYACLPVLVTYPIFIGWLSHQVTLKLWEHRNIL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVSRTDSLTGLLNHGAWKDLLDLEYASSQNAYQECVIALIDIDHFKVINDTYGHLMGDT
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VLQSISEALIENLRDSDLIGRCGGDEFCVILPDTSLLQAKEILERLRLAIDEMTYTLHCD
HHHHHHHHHHHHCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEE
LKVSLSIGIAAYSPEMPDASSWLHEADKALYLAKSTGRNRVASPQDAPPELQSLGAQA
EEEEEEEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]