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The map label for this gene is sotB [H]

Identifier: 66046990

GI number: 66046990

Start: 4479774

End: 4480976

Strand: Direct

Name: sotB [H]

Synonym: Psyr_3762

Alternate gene names: 66046990

Gene position: 4479774-4480976 (Clockwise)

Preceding gene: 66046989

Following gene: 66046991

Centisome position: 73.51

GC content: 61.6

Gene sequence:

>1203_bases
ATGCCTTCTCTGGAAACCACTGCCTCCGGCGCTCGCAGCGCAAGCTCGACCGGCGCCGGCTTGTCCATCGCGATTCTGGC
CCTGGCCGGCTTCGTGATCGTCACCACTGAATTTCTCATCATCGGTCTGTTGCCTTCGATGGCCCGTGATCTGGGAATCT
CCATCTCTACTGCCGGTTTGCTGGTGACGCTGTTCGCCTTCACGGTGATGCTCTTTGGCCCACCGCTGACGGCCATGCTT
TCGCACCTGGACCGCAAGCGCACGTTCATCGTCATTCTGCTGATCTTTGCCGCCTCCAACGCACTGGCGGCGGTATCGAG
CAATATCTGGGTGCTGGCGCTGGCACGGTTCATTCCGGCACTGGCCTTGCCAGTGTTCTGGGGCACCGCCAGTGAAACGG
CAAGCCTGCTGGCCGGACCGAAGCGCGCTGGCAAGGCCGTTGCGCAGGTCTACCTCGGTATCTCGGCTGCCATGCTGTTC
GGTATCCCGCTGGGTACGGTATTCGCCGATGCCGTGGGTTGGCGCGGGGCATTCTGGGCTCTGACGTTGCTGTCAGCGTT
GATGGCTTTGTTGCTGGCACTGTCGATGCCGCGTATCGAACCTACCGCAAAGGTCGGCCTCGCGGAGCAGGCAAAAATTC
TTCGGGATCCGTTTTTCCTCGCCAACCTGCTGCTGTCCATCCTGCTGTTCACGGCCATGTTCGGCGCCTATACCTATCTG
GCTGATACGCTGGAACGCATCGCGGGCATCGAATCGGCTCAAGTGGGTTGGTGGTTGATGGGCTTCGGCGCGGTCGGCCT
GATCGGCAATGCCCTGGGTGGACGTTATGTGGACCGCAGCCCGCTCGGCTCGACCATGGCGTTTGCGCTGCTGCTCGCAC
TGGGCATGACCGCAAGCGTACCCGCCGCAGGCTCCATGCCGCTGCTTGCCGTGGTACTGGTGATTTGGGGCATTGCGCAC
ACGGCGTTGTTTCCGATCTGCCAGATCAGGGTGATGAAAGCAGCGCCTCAGGCCCAGGCACTGGCCGGGACCCTGAATGT
CTCGGCAGCCAATGCCGGCATCGGTCTGGGATCGATCATCGGAGGCCTTACCATCGAGCACCTGGGCCTGGGTGCCGTAG
GGTATGTCGCAGCTGTTGTTGCGCTGCTGTCCATCGGCGTTGCATGGATGACCAGCATGCAGAAAAACAGGGCACCGTTG
TAA

Upstream 100 bases:

>100_bases
TAATTAGTGAATTTCAGTCCACAATAAAGGGAAAACTTGGCAAAGATACAAGCTCTTTTCTGCAATAAGCTGGCGGACTT
ATTTTTAATGGGTCTGCACT

Downstream 100 bases:

>100_bases
CCGCCTGACCGTCGCTTTACTGAATTCGCCGGGCAGTGTGTCTGCCAACAACCAGACGCCCTGCCCCGGTTATTCACGGT
GTATTAGATTGTAAGTTTCG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MPSLETTASGARSASSTGAGLSIAILALAGFVIVTTEFLIIGLLPSMARDLGISISTAGLLVTLFAFTVMLFGPPLTAML
SHLDRKRTFIVILLIFAASNALAAVSSNIWVLALARFIPALALPVFWGTASETASLLAGPKRAGKAVAQVYLGISAAMLF
GIPLGTVFADAVGWRGAFWALTLLSALMALLLALSMPRIEPTAKVGLAEQAKILRDPFFLANLLLSILLFTAMFGAYTYL
ADTLERIAGIESAQVGWWLMGFGAVGLIGNALGGRYVDRSPLGSTMAFALLLALGMTASVPAAGSMPLLAVVLVIWGIAH
TALFPICQIRVMKAAPQAQALAGTLNVSAANAGIGLGSIIGGLTIEHLGLGAVGYVAAVVALLSIGVAWMTSMQKNRAPL

Sequences:

>Translated_400_residues
MPSLETTASGARSASSTGAGLSIAILALAGFVIVTTEFLIIGLLPSMARDLGISISTAGLLVTLFAFTVMLFGPPLTAML
SHLDRKRTFIVILLIFAASNALAAVSSNIWVLALARFIPALALPVFWGTASETASLLAGPKRAGKAVAQVYLGISAAMLF
GIPLGTVFADAVGWRGAFWALTLLSALMALLLALSMPRIEPTAKVGLAEQAKILRDPFFLANLLLSILLFTAMFGAYTYL
ADTLERIAGIESAQVGWWLMGFGAVGLIGNALGGRYVDRSPLGSTMAFALLLALGMTASVPAAGSMPLLAVVLVIWGIAH
TALFPICQIRVMKAAPQAQALAGTLNVSAANAGIGLGSIIGGLTIEHLGLGAVGYVAAVVALLSIGVAWMTSMQKNRAPL
>Mature_399_residues
PSLETTASGARSASSTGAGLSIAILALAGFVIVTTEFLIIGLLPSMARDLGISISTAGLLVTLFAFTVMLFGPPLTAMLS
HLDRKRTFIVILLIFAASNALAAVSSNIWVLALARFIPALALPVFWGTASETASLLAGPKRAGKAVAQVYLGISAAMLFG
IPLGTVFADAVGWRGAFWALTLLSALMALLLALSMPRIEPTAKVGLAEQAKILRDPFFLANLLLSILLFTAMFGAYTYLA
DTLERIAGIESAQVGWWLMGFGAVGLIGNALGGRYVDRSPLGSTMAFALLLALGMTASVPAAGSMPLLAVVLVIWGIAHT
ALFPICQIRVMKAAPQAQALAGTLNVSAANAGIGLGSIIGGLTIEHLGLGAVGYVAAVVALLSIGVAWMTSMQKNRAPL

Specific function: Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites [H]

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=331, Percent_Identity=33.5347432024169, Blast_Score=155, Evalue=6e-39,
Organism=Escherichia coli, GI1787808, Length=376, Percent_Identity=29.7872340425532, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI145693198, Length=350, Percent_Identity=26.2857142857143, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786595, Length=366, Percent_Identity=28.4153005464481, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41235; Mature: 41104

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLETTASGARSASSTGAGLSIAILALAGFVIVTTEFLIIGLLPSMARDLGISISTAGL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LVTLFAFTVMLFGPPLTAMLSHLDRKRTFIVILLIFAASNALAAVSSNIWVLALARFIPA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH
LALPVFWGTASETASLLAGPKRAGKAVAQVYLGISAAMLFGIPLGTVFADAVGWRGAFWA
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHH
LTLLSALMALLLALSMPRIEPTAKVGLAEQAKILRDPFFLANLLLSILLFTAMFGAYTYL
HHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ADTLERIAGIESAQVGWWLMGFGAVGLIGNALGGRYVDRSPLGSTMAFALLLALGMTASV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PAAGSMPLLAVVLVIWGIAHTALFPICQIRVMKAAPQAQALAGTLNVSAANAGIGLGSII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCHHHHH
GGLTIEHLGLGAVGYVAAVVALLSIGVAWMTSMQKNRAPL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSLETTASGARSASSTGAGLSIAILALAGFVIVTTEFLIIGLLPSMARDLGISISTAGL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LVTLFAFTVMLFGPPLTAMLSHLDRKRTFIVILLIFAASNALAAVSSNIWVLALARFIPA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHH
LALPVFWGTASETASLLAGPKRAGKAVAQVYLGISAAMLFGIPLGTVFADAVGWRGAFWA
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHH
LTLLSALMALLLALSMPRIEPTAKVGLAEQAKILRDPFFLANLLLSILLFTAMFGAYTYL
HHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
ADTLERIAGIESAQVGWWLMGFGAVGLIGNALGGRYVDRSPLGSTMAFALLLALGMTASV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCC
PAAGSMPLLAVVLVIWGIAHTALFPICQIRVMKAAPQAQALAGTLNVSAANAGIGLGSII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCHHHHH
GGLTIEHLGLGAVGYVAAVVALLSIGVAWMTSMQKNRAPL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA