| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046974
Identifier: 66046974
GI number: 66046974
Start: 4463509
End: 4464039
Strand: Reverse
Name: 66046974
Synonym: Psyr_3746
Alternate gene names: NA
Gene position: 4464039-4463509 (Counterclockwise)
Preceding gene: 66046979
Following gene: 66046969
Centisome position: 73.26
GC content: 51.22
Gene sequence:
>531_bases ATGGATATGTGTCTGGCTCTGGCCGAGCTGTTGGCAAAAGAAGCTCTGCGCAATGTTCTCCTGTTCTGCGGAGTGCTCAC TGCAATCGTTTCGATGTACATGGTGCTGGCGACTGCAAAGAAGAAACAGACCGCAGACCTGTTATTTGGGTGCCGGCTGG ATGAGCAGTTGCAACTGGGTAACGCGCGCATCGCCGCCATGCATGATGCCCAGTCGCCGATGAAGGATTTGCTTTTGTCC TGCAACGAGGCTGATCGCAAGGAAAAGGAAGCGGTCAAGTACGTGCTGAACCATTGGGAGCGAGTGGCCGTTGGTATTGT TCAAGGGATCTACCACGAGGAAATGCTGCGCCAGTCCAACCATTCAAATGTCGTGAGCCTGTACAAGAAAGCCAAGCCCT TTATAGACGCGGTGCGTTACAAGGAGCAGAAGGACACGTTTTACAGACATTTTGAAAAAATGGCTTTGTCTTGGGATGAG CGTCCTCTGAAAAACCTGAGCACATGGCCCTATTTCAAAAAGTCAGCCTGA
Upstream 100 bases:
>100_bases ACGTCGCACAGGCTTGCGAAGAGTACGAAGGCTTTTAAACTCGTTCAGGAATTTCAAATGGAGCCCCGATCGGTCTCCAT TTTTTTATGAGAAAAATCAT
Downstream 100 bases:
>100_bases GGTGCGTCGGTGGTTGTCCCCGCGCCAACAGGTGTTTCGAATTGAAGGCGCAACTGCCAGCAGACCCGCTCAATACCCGG TCATCTCCAGATACCCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDMCLALAELLAKEALRNVLLFCGVLTAIVSMYMVLATAKKKQTADLLFGCRLDEQLQLGNARIAAMHDAQSPMKDLLLS CNEADRKEKEAVKYVLNHWERVAVGIVQGIYHEEMLRQSNHSNVVSLYKKAKPFIDAVRYKEQKDTFYRHFEKMALSWDE RPLKNLSTWPYFKKSA
Sequences:
>Translated_176_residues MDMCLALAELLAKEALRNVLLFCGVLTAIVSMYMVLATAKKKQTADLLFGCRLDEQLQLGNARIAAMHDAQSPMKDLLLS CNEADRKEKEAVKYVLNHWERVAVGIVQGIYHEEMLRQSNHSNVVSLYKKAKPFIDAVRYKEQKDTFYRHFEKMALSWDE RPLKNLSTWPYFKKSA >Mature_176_residues MDMCLALAELLAKEALRNVLLFCGVLTAIVSMYMVLATAKKKQTADLLFGCRLDEQLQLGNARIAAMHDAQSPMKDLLLS CNEADRKEKEAVKYVLNHWERVAVGIVQGIYHEEMLRQSNHSNVVSLYKKAKPFIDAVRYKEQKDTFYRHFEKMALSWDE RPLKNLSTWPYFKKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20287; Mature: 20287
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMCLALAELLAKEALRNVLLFCGVLTAIVSMYMVLATAKKKQTADLLFGCRLDEQLQLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC NARIAAMHDAQSPMKDLLLSCNEADRKEKEAVKYVLNHWERVAVGIVQGIYHEEMLRQSN CCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HSNVVSLYKKAKPFIDAVRYKEQKDTFYRHFEKMALSWDERPLKNLSTWPYFKKSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDMCLALAELLAKEALRNVLLFCGVLTAIVSMYMVLATAKKKQTADLLFGCRLDEQLQLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC NARIAAMHDAQSPMKDLLLSCNEADRKEKEAVKYVLNHWERVAVGIVQGIYHEEMLRQSN CCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HSNVVSLYKKAKPFIDAVRYKEQKDTFYRHFEKMALSWDERPLKNLSTWPYFKKSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA