Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yhhW [C]

Identifier: 66046837

GI number: 66046837

Start: 4291591

End: 4292313

Strand: Direct

Name: yhhW [C]

Synonym: Psyr_3608

Alternate gene names: 66046837

Gene position: 4291591-4292313 (Clockwise)

Preceding gene: 66046833

Following gene: 66046838

Centisome position: 70.43

GC content: 60.44

Gene sequence:

>723_bases
ATGCTGACTCTTCGCAAAGCCTCTGATCGTGGCGCAGCCGATCATGGCTGGTTGAAATCCTTTCACACCTTTTCCTTTGC
CGGCTACCGCAACCCGCAGGAACAAGGCTTTTCCGACCTGCTGGTGATCAACGACGACCGTGTCAGTGCAGGCAAAGGTT
TCGGCCAGCATCCTCACCGGGACATGGAGATCTTTTCCTATGTGCTGGAAGGCGCGCTGGAACACAAGGATACGCTGGGC
ACCGGCTCGGTGATTCGTCCCGGTGACGTGCAATTGATGAGCGCCGGCACCGGTGTGGCACACAGCGAGTTCAACCATTC
GCACACCGAGGGCGTGCATTTTCTGCAGATCTGGATCGTGCCGAATGTTGCAGGCGCGGCGCCCAACTACCAGGAGAAGC
ACTTTAGCCCCGAGCAGAAACGCGGTCGCTTGCAGTTGATCATTTCGCCGGAAGGCGAGAACGGTGCGCTCAAGGTGCGC
CAGGACGCTCGGGTGTATGCCGGCCTGTTCGATGGCGATGAAACCGCGACGCTGGAGCTGGCGGCCAACCGCTACGCCTA
CGTGCACGTTGCGCGTGGCAGCGTGGTGCTCAATGGCGAGCAACTGGGCGAAGGGGATGGCGTGCGTGTCCGCGACGAAC
AGACGCTGAGCCTGAGCGCAGGGGTTGACGCAGAGGTGTTGGTGTTCGACATGCGGCCAAACGAATTGCCGCAGATGCCT
TGA

Upstream 100 bases:

>100_bases
TTCATATTTCAGCTACTTATTGCGACAGTCGATAAGCCGTACGCTTCGTCCTACGTGATCGATTGCTGAATGTGCAGCGT
CGATAGATGGAGAAAGAATC

Downstream 100 bases:

>100_bases
GCCTGAAATGAAAAACGCCGCTCTTGGAGCGGCGTTCCTTTATATAGCGTCAAACCCATAGGACGTTAAAACATCTGGGT
TAAAACGCACAAACAAAAAC

Product: Pirin, N-terminal

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHRDMEIFSYVLEGALEHKDTLG
TGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIVPNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVR
QDARVYAGLFDGDETATLELAANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP

Sequences:

>Translated_240_residues
MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHRDMEIFSYVLEGALEHKDTLG
TGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIVPNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVR
QDARVYAGLFDGDETATLELAANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP
>Mature_240_residues
MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHRDMEIFSYVLEGALEHKDTLG
TGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIVPNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVR
QDARVYAGLFDGDETATLELAANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4505823, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=48.068669527897, Blast_Score=242, Evalue=2e-65,
Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=30.9322033898305, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 26307; Mature: 26307

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHR
CCEEECCCCCCCCCHHHHHHHHEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCC
DMEIFSYVLEGALEHKDTLGTGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIV
HHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE
PNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVRQDARVYAGLFDGDETATLEL
CCCCCCCCCCHHHCCCCHHHCCEEEEEECCCCCCCEEEEECCCEEEEEEECCCCEEEEEE
AANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP
ECCCEEEEEEECCEEEECCHHCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHR
CCEEECCCCCCCCCHHHHHHHHEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCC
DMEIFSYVLEGALEHKDTLGTGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIV
HHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE
PNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVRQDARVYAGLFDGDETATLEL
CCCCCCCCCCHHHCCCCHHHCCEEEEEECCCCCCCEEEEECCCEEEEEEECCCCEEEEEE
AANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP
ECCCEEEEEEECCEEEECCHHCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]