| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yhhW [C]
Identifier: 66046837
GI number: 66046837
Start: 4291591
End: 4292313
Strand: Direct
Name: yhhW [C]
Synonym: Psyr_3608
Alternate gene names: 66046837
Gene position: 4291591-4292313 (Clockwise)
Preceding gene: 66046833
Following gene: 66046838
Centisome position: 70.43
GC content: 60.44
Gene sequence:
>723_bases ATGCTGACTCTTCGCAAAGCCTCTGATCGTGGCGCAGCCGATCATGGCTGGTTGAAATCCTTTCACACCTTTTCCTTTGC CGGCTACCGCAACCCGCAGGAACAAGGCTTTTCCGACCTGCTGGTGATCAACGACGACCGTGTCAGTGCAGGCAAAGGTT TCGGCCAGCATCCTCACCGGGACATGGAGATCTTTTCCTATGTGCTGGAAGGCGCGCTGGAACACAAGGATACGCTGGGC ACCGGCTCGGTGATTCGTCCCGGTGACGTGCAATTGATGAGCGCCGGCACCGGTGTGGCACACAGCGAGTTCAACCATTC GCACACCGAGGGCGTGCATTTTCTGCAGATCTGGATCGTGCCGAATGTTGCAGGCGCGGCGCCCAACTACCAGGAGAAGC ACTTTAGCCCCGAGCAGAAACGCGGTCGCTTGCAGTTGATCATTTCGCCGGAAGGCGAGAACGGTGCGCTCAAGGTGCGC CAGGACGCTCGGGTGTATGCCGGCCTGTTCGATGGCGATGAAACCGCGACGCTGGAGCTGGCGGCCAACCGCTACGCCTA CGTGCACGTTGCGCGTGGCAGCGTGGTGCTCAATGGCGAGCAACTGGGCGAAGGGGATGGCGTGCGTGTCCGCGACGAAC AGACGCTGAGCCTGAGCGCAGGGGTTGACGCAGAGGTGTTGGTGTTCGACATGCGGCCAAACGAATTGCCGCAGATGCCT TGA
Upstream 100 bases:
>100_bases TTCATATTTCAGCTACTTATTGCGACAGTCGATAAGCCGTACGCTTCGTCCTACGTGATCGATTGCTGAATGTGCAGCGT CGATAGATGGAGAAAGAATC
Downstream 100 bases:
>100_bases GCCTGAAATGAAAAACGCCGCTCTTGGAGCGGCGTTCCTTTATATAGCGTCAAACCCATAGGACGTTAAAACATCTGGGT TAAAACGCACAAACAAAAAC
Product: Pirin, N-terminal
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHRDMEIFSYVLEGALEHKDTLG TGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIVPNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVR QDARVYAGLFDGDETATLELAANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP
Sequences:
>Translated_240_residues MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHRDMEIFSYVLEGALEHKDTLG TGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIVPNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVR QDARVYAGLFDGDETATLELAANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP >Mature_240_residues MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHRDMEIFSYVLEGALEHKDTLG TGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIVPNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVR QDARVYAGLFDGDETATLELAANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4505823, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=48.068669527897, Blast_Score=242, Evalue=2e-65, Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=30.9322033898305, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 26307; Mature: 26307
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHR CCEEECCCCCCCCCHHHHHHHHEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCC DMEIFSYVLEGALEHKDTLGTGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIV HHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE PNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVRQDARVYAGLFDGDETATLEL CCCCCCCCCCHHHCCCCHHHCCEEEEEECCCCCCCEEEEECCCEEEEEEECCCCEEEEEE AANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP ECCCEEEEEEECCEEEECCHHCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MLTLRKASDRGAADHGWLKSFHTFSFAGYRNPQEQGFSDLLVINDDRVSAGKGFGQHPHR CCEEECCCCCCCCCHHHHHHHHEEEECCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCC DMEIFSYVLEGALEHKDTLGTGSVIRPGDVQLMSAGTGVAHSEFNHSHTEGVHFLQIWIV HHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE PNVAGAAPNYQEKHFSPEQKRGRLQLIISPEGENGALKVRQDARVYAGLFDGDETATLEL CCCCCCCCCCHHHCCCCHHHCCEEEEEECCCCCCCEEEEECCCEEEEEEECCCCEEEEEE AANRYAYVHVARGSVVLNGEQLGEGDGVRVRDEQTLSLSAGVDAEVLVFDMRPNELPQMP ECCCEEEEEEECCEEEECCHHCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]