Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 66046827

GI number: 66046827

Start: 4279077

End: 4279934

Strand: Reverse

Name: ssuC [H]

Synonym: Psyr_3598

Alternate gene names: 66046827

Gene position: 4279934-4279077 (Counterclockwise)

Preceding gene: 66046829

Following gene: 66046826

Centisome position: 70.24

GC content: 60.49

Gene sequence:

>858_bases
ATGTCTGACACAACGCTCAACCCCGCAGAACCCGGTTTTCTGGTGGTGAACAAACCCGAACAGGGGCGCGTCTCGCAATC
GGGTCGCCCGCGCTGGCAAGTGCCGGGTTTTGTCTTGCGTCTGCTCAGCCCGCTGGTGCTGTTGCTGCTCTGGGAACTGG
CTTCACAAACCGGCCTGCTGCCCGTTCGCGTGATTGCCGCGCCGTCGCAGATCGGCGGTACGCTCTGGTCGATGATCGTC
TCGGGCGAACTGGCCCACCACTTGTGGGTTTCGTTGCAACGGGCGCTGTTGGGCTTGAGCATTGGCGTCAGCATCGGCGT
GGTCGCTGCGCTGGTGACCGGGCTTTCCCGGCGCGGCGAAATCGTTCTCGACTCGCCCATGCAGAGGTTGCGCACCATTC
CCTCGCTGGCATTGGTGCCACTGTTCATCCTCTGGTTCGGCATTGGCGAGTTCACCAAAGTGGCGCTGATCGTCATGGGC
ACCACCTTTCCGGTGTACCTGAACCTGTTTTCCGGCATCCGCAATATCGACCCGAAACTGATCGAGGCTGCCAATACGCT
CGGCTTGAGCCGCCGCGAACTGATCTGGCACGTCATCCTGCCCGGTTCGCTGCCTGCGTTTTTTGTCGGGCTGCGCTATT
CACTGGGTATTTCGTGGCTGGCCCTGGTCTTTGTCGAGCAAATCAACACCACCGCTGGCATCGGTTATCTGGCCAGTGAT
GCACGGGACTTCATGCGCACTGATGTGATCGTTATCTGCCTGTTGATCTACAGCGTCCTTGGCCTGGTGATCGACGCCAT
CATTCGCACGCTGGAGCGCTATGCGCTGGCCTGGCGACCGACCTTCGTGAGGCATTGA

Upstream 100 bases:

>100_bases
AGGTCTAAATCGAATTTCACGCAGCGTTCTTATGCTCATAATATGGCCTTCATAATGCATCGGGTGCGTCCTGCCCGGTT
TGTCCAGGAAGGATGTACCC

Downstream 100 bases:

>100_bases
ACACATGGCGACTCCTGATCTGCGCAACACTCCATCCGTGTCTCCCGAGGCGGGGCAGGCGCCTGTACAACTGCGCAACG
TGGTGCGTCAGTTTGGCCGG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSDTTLNPAEPGFLVVNKPEQGRVSQSGRPRWQVPGFVLRLLSPLVLLLLWELASQTGLLPVRVIAAPSQIGGTLWSMIV
SGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALIVMG
TTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQINTTAGIGYLASD
ARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTFVRH

Sequences:

>Translated_285_residues
MSDTTLNPAEPGFLVVNKPEQGRVSQSGRPRWQVPGFVLRLLSPLVLLLLWELASQTGLLPVRVIAAPSQIGGTLWSMIV
SGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALIVMG
TTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQINTTAGIGYLASD
ARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTFVRH
>Mature_284_residues
SDTTLNPAEPGFLVVNKPEQGRVSQSGRPRWQVPGFVLRLLSPLVLLLLWELASQTGLLPVRVIAAPSQIGGTLWSMIVS
GELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALIVMGT
TFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQINTTAGIGYLASDA
RDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTFVRH

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=239, Percent_Identity=47.2803347280335, Blast_Score=207, Evalue=7e-55,
Organism=Escherichia coli, GI1786564, Length=242, Percent_Identity=34.297520661157, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31326; Mature: 31195

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTTLNPAEPGFLVVNKPEQGRVSQSGRPRWQVPGFVLRLLSPLVLLLLWELASQTGLL
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PVRVIAAPSQIGGTLWSMIVSGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGE
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALIVMGTTFPVYLNLFSGIRNIDPKL
EEECCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH
IEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQINTTAGIGYLASD
HHHHHHHCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHH
ARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTFVRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
SDTTLNPAEPGFLVVNKPEQGRVSQSGRPRWQVPGFVLRLLSPLVLLLLWELASQTGLL
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PVRVIAAPSQIGGTLWSMIVSGELAHHLWVSLQRALLGLSIGVSIGVVAALVTGLSRRGE
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALIVMGTTFPVYLNLFSGIRNIDPKL
EEECCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH
IEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGISWLALVFVEQINTTAGIGYLASD
HHHHHHHCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHH
ARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYALAWRPTFVRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]