| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66046779
Identifier: 66046779
GI number: 66046779
Start: 4229485
End: 4229670
Strand: Direct
Name: 66046779
Synonym: Psyr_3550
Alternate gene names: NA
Gene position: 4229485-4229670 (Clockwise)
Preceding gene: 66046778
Following gene: 66046780
Centisome position: 69.41
GC content: 53.23
Gene sequence:
>186_bases ATGTCAAAATCCGCGTTGTCATTTCTGGTCCTGACGATCATGGCTGTCGTTGCCGACCTTTTGCTTCCTGTTAATGCACA AGCCATGAGTATCGCTGCAAATATCGCCGCCGGCGTATTCGCCAGTCTCTTCGTGGTTGCGCTGTTCGTCGGTCGTCGCT TCAAATTCGACCCGGTGCTTCGCTGA
Upstream 100 bases:
>100_bases GCTGGCTAATGACGATGATGAGTCACTTCAGTTTCCACGCGCCGAACAGCGCTGGGTTTTCTGATAACGCCCGCAACGAG CCTTTCAAGAGAGAGTAGCC
Downstream 100 bases:
>100_bases CAGCGAAGCTACCTGCGCCAATTTGCCCGGTCGTCTGACCGTTCGCATCCAGAATCCCCCCTCCTCCAAAAGAACCTTCC TGCACCGCAGCCAACCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MSKSALSFLVLTIMAVVADLLLPVNAQAMSIAANIAAGVFASLFVVALFVGRRFKFDPVLR
Sequences:
>Translated_61_residues MSKSALSFLVLTIMAVVADLLLPVNAQAMSIAANIAAGVFASLFVVALFVGRRFKFDPVLR >Mature_60_residues SKSALSFLVLTIMAVVADLLLPVNAQAMSIAANIAAGVFASLFVVALFVGRRFKFDPVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6483; Mature: 6352
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSALSFLVLTIMAVVADLLLPVNAQAMSIAANIAAGVFASLFVVALFVGRRFKFDPVL CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC R C >Mature Secondary Structure SKSALSFLVLTIMAVVADLLLPVNAQAMSIAANIAAGVFASLFVVALFVGRRFKFDPVL CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA