| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is hyuE [H]
Identifier: 66046758
GI number: 66046758
Start: 4205683
End: 4206414
Strand: Reverse
Name: hyuE [H]
Synonym: Psyr_3529
Alternate gene names: 66046758
Gene position: 4206414-4205683 (Counterclockwise)
Preceding gene: 66046759
Following gene: 66046754
Centisome position: 69.03
GC content: 64.21
Gene sequence:
>732_bases GTGCGTATTCAAGTGATCAACCCCAATACCAGCGAAGCCATGACCCACAAGATCGGTCTGGCCGCGCAAGCCGTGGCGCG CCCAGGCACACAGATCATCGCCTGCAGTCCTGCGGATGGCCCGGTGTCCATCGAAGGCCATTTCGATGAGGCGATCGCGA CGCTGGGCGTGCTGGAGGAAGTGCGCAAGGGGCGCGAACAACAGGTCGACGCGCACATCATCGCCTGTTTCGGCGACCCC GGCCTGCTGGCGGCACGCGAGTACGCCAGCGCCCCGGTGATCGGCATCGCCGAAGCGGCCTTTCATATGGCCAGCCTGAT TTCTACCCGTTTCGCCGTGGTCACGACGCTGACCCGCACGCGGATCATCGCCGAGCACTTGCTGCAGCGTTATGGCTTCA GTGAGTTATGCACATCGGTGCGCTGTATCGATCTGCCGGTGCTGGCGCTGGAGGAAAGCGGGCCGGAGCTCATCGAATGC ATGGCCGAACAGGCCCGTCGCGCCCGTGACGAAGAAGGGGCGGGAGCCATTGTGCTGGGTTGCGGCGGGATGGCGGATCT GGGCAGGCAACTGAGCGAAGCGATTGGCCTGCCGGTCATCGACGGCGTGGCAGCGGCGGTGAAACTGGCCGAATCGCTGG TGGATCTGGGCCTGACCACCAGCAAACACGGCGACCTGGCCGACCCCATCAGCAAACCGTTCAAAGGCCGGTTTGCCTAC CTGAGTCGGTGA
Upstream 100 bases:
>100_bases GAGCATTTGCGCCGCATCCGCGCCAGCCTGAATGTGGATGCGCCGCTCAGCGAGACAGTGGATTTTCATAGCATTTTCAA ACGGCGCTGAAGGAGTTCCG
Downstream 100 bases:
>100_bases TGGCGTTTGCCCGCAGGGCGCAGGAGCGAACGTGTTCGCGAAAGGGGCGGCATGAACGATGAACATACATCGTCTGCAAT GCCGTTCGCGAACAAGTTCG
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRIQVINPNTSEAMTHKIGLAAQAVARPGTQIIACSPADGPVSIEGHFDEAIATLGVLEEVRKGREQQVDAHIIACFGDP GLLAAREYASAPVIGIAEAAFHMASLISTRFAVVTTLTRTRIIAEHLLQRYGFSELCTSVRCIDLPVLALEESGPELIEC MAEQARRARDEEGAGAIVLGCGGMADLGRQLSEAIGLPVIDGVAAAVKLAESLVDLGLTTSKHGDLADPISKPFKGRFAY LSR
Sequences:
>Translated_243_residues MRIQVINPNTSEAMTHKIGLAAQAVARPGTQIIACSPADGPVSIEGHFDEAIATLGVLEEVRKGREQQVDAHIIACFGDP GLLAAREYASAPVIGIAEAAFHMASLISTRFAVVTTLTRTRIIAEHLLQRYGFSELCTSVRCIDLPVLALEESGPELIEC MAEQARRARDEEGAGAIVLGCGGMADLGRQLSEAIGLPVIDGVAAAVKLAESLVDLGLTTSKHGDLADPISKPFKGRFAY LSR >Mature_243_residues MRIQVINPNTSEAMTHKIGLAAQAVARPGTQIIACSPADGPVSIEGHFDEAIATLGVLEEVRKGREQQVDAHIIACFGDP GLLAAREYASAPVIGIAEAAFHMASLISTRFAVVTTLTRTRIIAEHLLQRYGFSELCTSVRCIDLPVLALEESGPELIEC MAEQARRARDEEGAGAIVLGCGGMADLGRQLSEAIGLPVIDGVAAAVKLAESLVDLGLTTSKHGDLADPISKPFKGRFAY LSR
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 25685; Mature: 25685
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQVINPNTSEAMTHKIGLAAQAVARPGTQIIACSPADGPVSIEGHFDEAIATLGVLEE CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHH VRKGREQQVDAHIIACFGDPGLLAAREYASAPVIGIAEAAFHMASLISTRFAVVTTLTRT HHCCHHHCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIIAEHLLQRYGFSELCTSVRCIDLPVLALEESGPELIECMAEQARRARDEEGAGAIVLG HHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEE CGGMADLGRQLSEAIGLPVIDGVAAAVKLAESLVDLGLTTSKHGDLADPISKPFKGRFAY CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHH LSR CCC >Mature Secondary Structure MRIQVINPNTSEAMTHKIGLAAQAVARPGTQIIACSPADGPVSIEGHFDEAIATLGVLEE CEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHH VRKGREQQVDAHIIACFGDPGLLAAREYASAPVIGIAEAAFHMASLISTRFAVVTTLTRT HHCCHHHCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RIIAEHLLQRYGFSELCTSVRCIDLPVLALEESGPELIECMAEQARRARDEEGAGAIVLG HHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEE CGGMADLGRQLSEAIGLPVIDGVAAAVKLAESLVDLGLTTSKHGDLADPISKPFKGRFAY CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHH LSR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]