| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046653
Identifier: 66046653
GI number: 66046653
Start: 4088850
End: 4089317
Strand: Reverse
Name: 66046653
Synonym: Psyr_3424
Alternate gene names: NA
Gene position: 4089317-4088850 (Counterclockwise)
Preceding gene: 66046656
Following gene: 66046641
Centisome position: 67.11
GC content: 60.04
Gene sequence:
>468_bases ATGTCAACGACACTCCCGTTGATCAACAGCATTACGATCCGCACTGCGACCTCTCAGACCACCTACAGTAGCGCCGGGCA AAGCACTGCCGAGGCGTCGGCAAGCGAGACAAAGGGCGTGCAGGTCAATTTGTCGGCAGAAGGCAAGGCGGCTGCGTCAT CGTCTTCCAGAAACGCTGATATCGAGCAGAGCGGTCTGCCGGCTTCCGTGCAGAAGATCCTCAAGGCGATTCGCGAACTT CAGCGCAGGATCGAGGAGACCATGGAGCAGATCCAGAAGGCCCTGAATGACCCCAGCCTGAGCCCCGAGGAGCGCAGGAC CAAGGCTGCGGCGCTACAGACCGTGCTCAGTACGTTGCAGGCGCAGGTGAGCAATTCCACGGCCGATCTGTCGTCGCTCA TGAACAGCCTGGGCTCCAGTGACGGCGACAAGACCAAGGCGGGCATGCTGGTTCTGGCCAAAATGTAG
Upstream 100 bases:
>100_bases GGCTTGTCGGGGCCAGCCTGCAAACCTGTCGGCGTCGTCAAGGTTGCGGATTGTCTGCCGATAAACCTGTATTCCTTCAG CCAAACCAGGATGCCCCGTC
Downstream 100 bases:
>100_bases CACTTGGCAACGGCTCATATCACCCGAGAGAACTGCTGTCTGTTTTTCTGCCGGGTCAGGTAGGCATCGAAGACCATGCA CACAGCGCGCACCAGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSTTLPLINSITIRTATSQTTYSSAGQSTAEASASETKGVQVNLSAEGKAAASSSSRNADIEQSGLPASVQKILKAIREL QRRIEETMEQIQKALNDPSLSPEERRTKAAALQTVLSTLQAQVSNSTADLSSLMNSLGSSDGDKTKAGMLVLAKM
Sequences:
>Translated_155_residues MSTTLPLINSITIRTATSQTTYSSAGQSTAEASASETKGVQVNLSAEGKAAASSSSRNADIEQSGLPASVQKILKAIREL QRRIEETMEQIQKALNDPSLSPEERRTKAAALQTVLSTLQAQVSNSTADLSSLMNSLGSSDGDKTKAGMLVLAKM >Mature_154_residues STTLPLINSITIRTATSQTTYSSAGQSTAEASASETKGVQVNLSAEGKAAASSSSRNADIEQSGLPASVQKILKAIRELQ RRIEETMEQIQKALNDPSLSPEERRTKAAALQTVLSTLQAQVSNSTADLSSLMNSLGSSDGDKTKAGMLVLAKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16258; Mature: 16127
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLPLINSITIRTATSQTTYSSAGQSTAEASASETKGVQVNLSAEGKAAASSSSRNAD CCCCCCHHHHEEEEECCCCCHHHHCCCHHHHHCHHHCCCEEEEECCCCCHHCCCCCCCCC IEQSGLPASVQKILKAIRELQRRIEETMEQIQKALNDPSLSPEERRTKAAALQTVLSTLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AQVSNSTADLSSLMNSLGSSDGDKTKAGMLVLAKM HHHCCCHHHHHHHHHHHCCCCCCCCHHCEEEEECC >Mature Secondary Structure STTLPLINSITIRTATSQTTYSSAGQSTAEASASETKGVQVNLSAEGKAAASSSSRNAD CCCCCHHHHEEEEECCCCCHHHHCCCHHHHHCHHHCCCEEEEECCCCCHHCCCCCCCCC IEQSGLPASVQKILKAIRELQRRIEETMEQIQKALNDPSLSPEERRTKAAALQTVLSTLQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH AQVSNSTADLSSLMNSLGSSDGDKTKAGMLVLAKM HHHCCCHHHHHHHHHHHCCCCCCCCHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA