| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66046641
Identifier: 66046641
GI number: 66046641
Start: 4076586
End: 4077374
Strand: Reverse
Name: 66046641
Synonym: Psyr_3412
Alternate gene names: NA
Gene position: 4077374-4076586 (Counterclockwise)
Preceding gene: 66046653
Following gene: 66046637
Centisome position: 66.91
GC content: 62.23
Gene sequence:
>789_bases ATGCCGATGCGCCTCGCGCTCGCGATTCGTGCAGGATTCGCAACCCTGTTCGCCGCTATAGTAGCGGGCCACTCGGCGAC TCACCTGAATGAGGCAACCATGAGCAACGGCTTGAAGCCTGTTATCGGTACGAATCAATGGCTGCACCTGATCAGTGACA GAGGCTGGCTATGGACGCCCGCTCGGCCTGCGGATGCGCTGGAAGCGCCGACTTTGCTGCTGGCGCACGGTGCAGGCGCA CCGATGGACAGCGACTTCATGAACCGCATGGCGGCTGATCTGGCGGCGCAAGGTATCAGCGTCCTGCGCTTCGAGTTTCC CTATATGGCGCAGCGGCGTCAGGGCGGCAGCAAGCGTCCACCCAATCCACAGGCGCAACTGCTGGAATGCTGGAGAGAAG TGTTCGCCTGCGCGCGTGCTCACATCTCCGGACGTCTGGCGGTCGGCGGCAAATCGATGGGCGGGCGGATGGCCAGCCTG ATCGCCGATGAGCTTGAGGTCGATGCGCTGGTGTGTCTGGGGTATCCGTTCTACGCCGTGGGCAAGCCTGAAAAACCACG CGTGGCTCATCTGGCCGAACTGAAGACACCCACGCTGATCGTGCAGGGCGAACGCGACGCGCTGGGTAATCGCGAAGCGG TGGAAGGCTATGCATTGTCGAGTGCCATCCGGCTGCACTGGTTGCCGACTGCCAATCATGACCTCAAACCATTGAAGGTC GCGGGCATCAGCCACGAGCAATGCCTGGCTGACTCCGCGAGAGAGATTGCCGGGTTCCTGCGCACCTGA
Upstream 100 bases:
>100_bases GTGTCAGGTTTGGGGCGCTCATCGCCTCGGTACTTTACCTTTTGCACCTTGACAGAGTACTCGGGCAGACCTGAATGGTG GCTGTCCGACGGGACGAGGC
Downstream 100 bases:
>100_bases GTCACCGGCAATACAGGTCGAAAGCGCCGTCGGTCACATCCAGGTTGATTGATGACATATTGAAACTGAATAAGCCTCTT ATCCGCAGTGTGCAGGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPMRLALAIRAGFATLFAAIVAGHSATHLNEATMSNGLKPVIGTNQWLHLISDRGWLWTPARPADALEAPTLLLAHGAGA PMDSDFMNRMAADLAAQGISVLRFEFPYMAQRRQGGSKRPPNPQAQLLECWREVFACARAHISGRLAVGGKSMGGRMASL IADELEVDALVCLGYPFYAVGKPEKPRVAHLAELKTPTLIVQGERDALGNREAVEGYALSSAIRLHWLPTANHDLKPLKV AGISHEQCLADSAREIAGFLRT
Sequences:
>Translated_262_residues MPMRLALAIRAGFATLFAAIVAGHSATHLNEATMSNGLKPVIGTNQWLHLISDRGWLWTPARPADALEAPTLLLAHGAGA PMDSDFMNRMAADLAAQGISVLRFEFPYMAQRRQGGSKRPPNPQAQLLECWREVFACARAHISGRLAVGGKSMGGRMASL IADELEVDALVCLGYPFYAVGKPEKPRVAHLAELKTPTLIVQGERDALGNREAVEGYALSSAIRLHWLPTANHDLKPLKV AGISHEQCLADSAREIAGFLRT >Mature_261_residues PMRLALAIRAGFATLFAAIVAGHSATHLNEATMSNGLKPVIGTNQWLHLISDRGWLWTPARPADALEAPTLLLAHGAGAP MDSDFMNRMAADLAAQGISVLRFEFPYMAQRRQGGSKRPPNPQAQLLECWREVFACARAHISGRLAVGGKSMGGRMASLI ADELEVDALVCLGYPFYAVGKPEKPRVAHLAELKTPTLIVQGERDALGNREAVEGYALSSAIRLHWLPTANHDLKPLKVA GISHEQCLADSAREIAGFLRT
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28304; Mature: 28173
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRLALAIRAGFATLFAAIVAGHSATHLNEATMSNGLKPVIGTNQWLHLISDRGWLWTP CCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECC ARPADALEAPTLLLAHGAGAPMDSDFMNRMAADLAAQGISVLRFEFPYMAQRRQGGSKRP CCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCC PNPQAQLLECWREVFACARAHISGRLAVGGKSMGGRMASLIADELEVDALVCLGYPFYAV CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCEEEEECCCEEEC GKPEKPRVAHLAELKTPTLIVQGERDALGNREAVEGYALSSAIRLHWLPTANHDLKPLKV CCCCCCHHHHHHHCCCCEEEEECCHHHCCCCHHHHHHHHHCEEEEEEECCCCCCCCCEEE AGISHEQCLADSAREIAGFLRT ECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PMRLALAIRAGFATLFAAIVAGHSATHLNEATMSNGLKPVIGTNQWLHLISDRGWLWTP CCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEECC ARPADALEAPTLLLAHGAGAPMDSDFMNRMAADLAAQGISVLRFEFPYMAQRRQGGSKRP CCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCCCC PNPQAQLLECWREVFACARAHISGRLAVGGKSMGGRMASLIADELEVDALVCLGYPFYAV CCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCEEEEECCCEEEC GKPEKPRVAHLAELKTPTLIVQGERDALGNREAVEGYALSSAIRLHWLPTANHDLKPLKV CCCCCCHHHHHHHCCCCEEEEECCHHHCCCCHHHHHHHHHCEEEEEEECCCCCCCCCEEE AGISHEQCLADSAREIAGFLRT ECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA