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The map label for this gene is ccmD [H]

Identifier: 66046619

GI number: 66046619

Start: 4049062

End: 4049238

Strand: Reverse

Name: ccmD [H]

Synonym: Psyr_3390

Alternate gene names: 66046619

Gene position: 4049238-4049062 (Counterclockwise)

Preceding gene: 66046620

Following gene: 66046618

Centisome position: 66.45

GC content: 61.02

Gene sequence:

>177_bases
TTGAGTTTTGCATCGTTCAGCGATTTTCTTGCCATGGGTCGCCACGGGGTATTTGTCTGGTCGGCCTACGGCCTGTGCCT
TGTGGTGCTGCTGATCAACGTGGCGCTGCCGCTATGGGCGCGGCAGCGCTTTCTGAAACAGCAGGCGCGTCGCCTGAAGC
GGGGGAATCGCCCGTGA

Upstream 100 bases:

>100_bases
TGCGTCTTGAAGTGTTGCGTCGCGAAGCGCGCACCCAGTGGGTCAAGGCCGAGATTCTGCGCAGCCTGGGGCACACAGCA
GCGCAGTCGGAGAACACGCT

Downstream 100 bases:

>100_bases
ACCCGCTACGCAAAAAACGCTTGTTGATCATTGTCGCGCTGCTGGCCGGTGTTGGTCTGGCCGTGACCCTGGCTCTCAGC
GCCTTGCAGGAAAACATCAA

Product: Heme exporter protein D (CcmD)

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmD [H]

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MSFASFSDFLAMGRHGVFVWSAYGLCLVVLLINVALPLWARQRFLKQQARRLKRGNRP

Sequences:

>Translated_58_residues
MSFASFSDFLAMGRHGVFVWSAYGLCLVVLLINVALPLWARQRFLKQQARRLKRGNRP
>Mature_57_residues
SFASFSDFLAMGRHGVFVWSAYGLCLVVLLINVALPLWARQRFLKQQARRLKRGNRP

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (Potential) [H]

COG id: COG3114

COG function: function code U; Heme exporter protein D

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmD/CycX/HelD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007078 [H]

Pfam domain/function: PF04995 CcmD [H]

EC number: NA

Molecular weight: Translated: 6694; Mature: 6563

Theoretical pI: Translated: 12.39; Mature: 12.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFASFSDFLAMGRHGVFVWSAYGLCLVVLLINVALPLWARQRFLKQQARRLKRGNRP
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFASFSDFLAMGRHGVFVWSAYGLCLVVLLINVALPLWARQRFLKQQARRLKRGNRP
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8692990 [H]