| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046611
Identifier: 66046611
GI number: 66046611
Start: 4042017
End: 4042850
Strand: Direct
Name: 66046611
Synonym: Psyr_3382
Alternate gene names: NA
Gene position: 4042017-4042850 (Clockwise)
Preceding gene: 66046610
Following gene: 66046612
Centisome position: 66.33
GC content: 57.19
Gene sequence:
>834_bases ATGGACAGCTCTCTCAGCCGCCGCGAGCGGCTGCATATTGTTATTTTCGAGGCCAATACGCCTGCCGGGCGGATGTTTGA CAAGGCGGTGCTGGTCGCGATTCTGCTCAGTCTGCTGGTCACTATCATCGACAGCATCGAGAGTATTCATCGTGATTACG CGATGCTTTTCGCGTGGATCGAATGGGGCTTCACGCTGATGTTTGCCATCGAATACATGCTGCGCCTCTATTGCTCGCCA CGGCCGCTGAAGTACGCCTTCAGTTTCTACGGGTTGGTGGACCTGCTGGCGATCGTGCCGGGCGTGCTGTCGATCTATTA CAGCGATGCGCAATACCTGCTGATCGTGCGGATCATCCGTATGCTGCGGATCTTCAGGGTGCTCAAGCTCGGCACCTACC TGCGCCAGGCCAATTACCTGCTGGCGGCGCTGCGTGGCAGCAAGCAGAAGATCATCGTGTTTCTGGTCACGGTGTCTACG CTGGTCACGGTGTTCGGCACACTGATGTATGTGATCGAAGGTCCGGAGCATGGTTTCACCAGCATTCCCAAGGGCATTTA CTGGGCCATCGTGACCCTGACGACGGTGGGCTTTGGCGATATAGTGCCCAAGACCCCGCTCGGCCAGATGCTCTCCTCGC TGGTGATGATCACCGGTTACTCGATCATCGCCGTGCCCACCGGGATATTCACCGCCGAGCTGGCCAACGCCATGCGCGGC GAGCAGCTGAAACACGATTGTCCGGTGTGCTCGAAAAACCTTCACGAGCATGGCGCGGCGTTCTGCTCACGCTGCGGCAA TCAATTGTTTACAAAAACAGAGCACAAGGCATAA
Upstream 100 bases:
>100_bases CCAGCGAAGCGTCGCCCGGCTCGCTCCCAGGGTGCTTGTGTGCTTGCACTCAACCACCCAATGCTCCTAGGCTCACCCGA TCTTTGATTCGGGAAGCACC
Downstream 100 bases:
>100_bases GCAAAGATCTTTTCGGTCTTTAAACCGCAGGCACGATGCTGATAGTGTCGCGGCATTACGCCATCAGGCTTGTCACATGA CGCTTCATCTCAAGGACCTT
Product: Ion transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MDSSLSRRERLHIVIFEANTPAGRMFDKAVLVAILLSLLVTIIDSIESIHRDYAMLFAWIEWGFTLMFAIEYMLRLYCSP RPLKYAFSFYGLVDLLAIVPGVLSIYYSDAQYLLIVRIIRMLRIFRVLKLGTYLRQANYLLAALRGSKQKIIVFLVTVST LVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTPLGQMLSSLVMITGYSIIAVPTGIFTAELANAMRG EQLKHDCPVCSKNLHEHGAAFCSRCGNQLFTKTEHKA
Sequences:
>Translated_277_residues MDSSLSRRERLHIVIFEANTPAGRMFDKAVLVAILLSLLVTIIDSIESIHRDYAMLFAWIEWGFTLMFAIEYMLRLYCSP RPLKYAFSFYGLVDLLAIVPGVLSIYYSDAQYLLIVRIIRMLRIFRVLKLGTYLRQANYLLAALRGSKQKIIVFLVTVST LVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTPLGQMLSSLVMITGYSIIAVPTGIFTAELANAMRG EQLKHDCPVCSKNLHEHGAAFCSRCGNQLFTKTEHKA >Mature_277_residues MDSSLSRRERLHIVIFEANTPAGRMFDKAVLVAILLSLLVTIIDSIESIHRDYAMLFAWIEWGFTLMFAIEYMLRLYCSP RPLKYAFSFYGLVDLLAIVPGVLSIYYSDAQYLLIVRIIRMLRIFRVLKLGTYLRQANYLLAALRGSKQKIIVFLVTVST LVTVFGTLMYVIEGPEHGFTSIPKGIYWAIVTLTTVGFGDIVPKTPLGQMLSSLVMITGYSIIAVPTGIFTAELANAMRG EQLKHDCPVCSKNLHEHGAAFCSRCGNQLFTKTEHKA
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cyclic nucleotide-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27436974, Length=219, Percent_Identity=31.5068493150685, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI20070166, Length=169, Percent_Identity=36.6863905325444, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI4826784, Length=186, Percent_Identity=32.7956989247312, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI9789987, Length=193, Percent_Identity=26.9430051813472, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI27436984, Length=195, Percent_Identity=26.6666666666667, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI27436986, Length=195, Percent_Identity=26.6666666666667, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI88758565, Length=178, Percent_Identity=29.7752808988764, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI4826782, Length=176, Percent_Identity=30.1136363636364, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI25952108, Length=199, Percent_Identity=29.6482412060301, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI45383011, Length=215, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI27436981, Length=188, Percent_Identity=27.6595744680851, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI88758576, Length=188, Percent_Identity=29.7872340425532, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI24497462, Length=188, Percent_Identity=29.7872340425532, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI119395748, Length=204, Percent_Identity=27.4509803921569, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI5031819, Length=119, Percent_Identity=36.9747899159664, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI25952087, Length=228, Percent_Identity=26.7543859649123, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27436988, Length=184, Percent_Identity=32.0652173913043, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI25952092, Length=179, Percent_Identity=29.608938547486, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI4504817, Length=177, Percent_Identity=28.8135593220339, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI27436996, Length=183, Percent_Identity=31.6939890710383, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI13492973, Length=186, Percent_Identity=28.494623655914, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI24497458, Length=196, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI19424136, Length=239, Percent_Identity=26.7782426778243, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI21217561, Length=196, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI21217563, Length=196, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI24497460, Length=203, Percent_Identity=26.6009852216749, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI4826786, Length=178, Percent_Identity=28.0898876404494, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI163792201, Length=185, Percent_Identity=28.1081081081081, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI27436993, Length=176, Percent_Identity=28.4090909090909, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI4504821, Length=188, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI19071574, Length=176, Percent_Identity=28.4090909090909, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI7657289, Length=245, Percent_Identity=24.4897959183673, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI32479527, Length=236, Percent_Identity=25.4237288135593, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI26638655, Length=219, Percent_Identity=25.5707762557078, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI32479525, Length=234, Percent_Identity=25.2136752136752, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI26638653, Length=219, Percent_Identity=25.5707762557078, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71989381, Length=203, Percent_Identity=34.9753694581281, Blast_Score=122, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71989376, Length=203, Percent_Identity=34.9753694581281, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71989369, Length=203, Percent_Identity=34.9753694581281, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71989361, Length=203, Percent_Identity=34.9753694581281, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI193206869, Length=216, Percent_Identity=32.8703703703704, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148255, Length=188, Percent_Identity=34.5744680851064, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17544122, Length=224, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17569273, Length=216, Percent_Identity=28.2407407407407, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71994313, Length=200, Percent_Identity=31, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994134, Length=207, Percent_Identity=25.6038647342995, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71994320, Length=201, Percent_Identity=31.3432835820896, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71986008, Length=187, Percent_Identity=32.620320855615, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71986003, Length=187, Percent_Identity=32.620320855615, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71986011, Length=187, Percent_Identity=32.620320855615, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI32564076, Length=192, Percent_Identity=27.0833333333333, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI32564088, Length=192, Percent_Identity=27.0833333333333, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI32564084, Length=192, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI32564090, Length=192, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI32564082, Length=193, Percent_Identity=27.979274611399, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI71986574, Length=189, Percent_Identity=28.042328042328, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI32564086, Length=192, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI32564080, Length=201, Percent_Identity=27.363184079602, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI32564074, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564068, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115532628, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71998749, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564072, Length=214, Percent_Identity=29.4392523364486, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI32564070, Length=214, Percent_Identity=29.4392523364486, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI72000220, Length=199, Percent_Identity=28.643216080402, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71985535, Length=187, Percent_Identity=27.807486631016, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25147238, Length=231, Percent_Identity=23.3766233766234, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25147242, Length=231, Percent_Identity=23.3766233766234, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI32564066, Length=237, Percent_Identity=22.7848101265823, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193207406, Length=196, Percent_Identity=26.530612244898, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI116007764, Length=192, Percent_Identity=32.8125, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281365536, Length=192, Percent_Identity=32.8125, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24656294, Length=192, Percent_Identity=32.8125, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24656289, Length=192, Percent_Identity=32.8125, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI161084970, Length=226, Percent_Identity=26.1061946902655, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI17737641, Length=226, Percent_Identity=26.1061946902655, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI17136468, Length=198, Percent_Identity=26.7676767676768, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28574020, Length=198, Percent_Identity=26.7676767676768, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24642914, Length=226, Percent_Identity=25.6637168141593, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI221330674, Length=198, Percent_Identity=26.7676767676768, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24642916, Length=242, Percent_Identity=25.6198347107438, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24642910, Length=208, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI45555859, Length=208, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI45549143, Length=208, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI161076829, Length=194, Percent_Identity=26.8041237113402, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI221330117, Length=226, Percent_Identity=22.1238938053097, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI281363095, Length=226, Percent_Identity=22.1238938053097, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330119, Length=226, Percent_Identity=22.1238938053097, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI281363097, Length=228, Percent_Identity=21.9298245614035, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR005821 - InterPro: IPR003091 - InterPro: IPR014710 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]
EC number: NA
Molecular weight: Translated: 31102; Mature: 31102
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSLSRRERLHIVIFEANTPAGRMFDKAVLVAILLSLLVTIIDSIESIHRDYAMLFAWI CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWGFTLMFAIEYMLRLYCSPRPLKYAFSFYGLVDLLAIVPGVLSIYYSDAQYLLIVRIIR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MLRIFRVLKLGTYLRQANYLLAALRGSKQKIIVFLVTVSTLVTVFGTLMYVIEGPEHGFT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC SIPKGIYWAIVTLTTVGFGDIVPKTPLGQMLSSLVMITGYSIIAVPTGIFTAELANAMRG CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHC EQLKHDCPVCSKNLHEHGAAFCSRCGNQLFTKTEHKA CHHHCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCC >Mature Secondary Structure MDSSLSRRERLHIVIFEANTPAGRMFDKAVLVAILLSLLVTIIDSIESIHRDYAMLFAWI CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWGFTLMFAIEYMLRLYCSPRPLKYAFSFYGLVDLLAIVPGVLSIYYSDAQYLLIVRIIR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MLRIFRVLKLGTYLRQANYLLAALRGSKQKIIVFLVTVSTLVTVFGTLMYVIEGPEHGFT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC SIPKGIYWAIVTLTTVGFGDIVPKTPLGQMLSSLVMITGYSIIAVPTGIFTAELANAMRG CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHC EQLKHDCPVCSKNLHEHGAAFCSRCGNQLFTKTEHKA CHHHCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1522059 [H]