| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is uspA1 [H]
Identifier: 66046522
GI number: 66046522
Start: 3940203
End: 3940643
Strand: Direct
Name: uspA1 [H]
Synonym: Psyr_3293
Alternate gene names: 66046522
Gene position: 3940203-3940643 (Clockwise)
Preceding gene: 66046513
Following gene: 66046524
Centisome position: 64.66
GC content: 59.64
Gene sequence:
>441_bases ATGCCATACAAACACATTCTGGTTGCCATCGACCTCACCGATGAGTGTGACCCGGTCATCCGTCGCGCCAGCCTGCTGGC CAAGGCCAGCGAGGCAAAATTGTCCGTCGTGCACATCGTCGAACCGATCGCGATGGCGTTCGGCGGCGACGTGCCGATGG ACCTTTCACAGCTGCAACAGCAACAGATCGATCAGGCCAGGGAGAAGCTCGGCAAGCTGAAGCTCAAGTATCCGCAACTG GAACACAGCGAAAGCCACATGGTGTTCGGTCAGCCACGCCAGGAAATCCACAAGCTGGCCAAGAGCGAAGCGTGCGATCT GATCGTTGTCGGCAGCCATGGCCGTCACGGCCTGGCTCTACTGCTCGGCTCGACAGCCAACGACGTTCTGCACGGCGCAC CCTGTGATGTGCTGGCAGTGAGCCTCAAGAAGCCTGAGTGA
Upstream 100 bases:
>100_bases TTACAACACTCTTGAAAACAATGACTTGCACATGGGCCTGCCCAGATGCCAACGAAAGAGCCATACTCCCATCACTGCAA TTCTCCCGGAGGACACCCTC
Downstream 100 bases:
>100_bases GCTGACCCGCTACAGCGAAAAGCCCGGTTAACCCGGGCTTTTTTTGCATCTCAGGAACGCGCCGGACGATCACTCGTCCA GTTCGGCCCAACGCTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPYKHILVAIDLTDECDPVIRRASLLAKASEAKLSVVHIVEPIAMAFGGDVPMDLSQLQQQQIDQAREKLGKLKLKYPQL EHSESHMVFGQPRQEIHKLAKSEACDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVSLKKPE
Sequences:
>Translated_146_residues MPYKHILVAIDLTDECDPVIRRASLLAKASEAKLSVVHIVEPIAMAFGGDVPMDLSQLQQQQIDQAREKLGKLKLKYPQL EHSESHMVFGQPRQEIHKLAKSEACDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVSLKKPE >Mature_145_residues PYKHILVAIDLTDECDPVIRRASLLAKASEAKLSVVHIVEPIAMAFGGDVPMDLSQLQQQQIDQAREKLGKLKLKYPQLE HSESHMVFGQPRQEIHKLAKSEACDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVSLKKPE
Specific function: Involved in stress response [H]
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 1660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 290 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4003 Molecules/Cell In: Growth Phase, G
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15943; Mature: 15812
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYKHILVAIDLTDECDPVIRRASLLAKASEAKLSVVHIVEPIAMAFGGDVPMDLSQLQQ CCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH QQIDQAREKLGKLKLKYPQLEHSESHMVFGQPRQEIHKLAKSEACDLIVVGSHGRHGLAL HHHHHHHHHHCCEEECCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCCCCEEE LLGSTANDVLHGAPCDVLAVSLKKPE EECCCCCHHHCCCCHHHEEEEECCCC >Mature Secondary Structure PYKHILVAIDLTDECDPVIRRASLLAKASEAKLSVVHIVEPIAMAFGGDVPMDLSQLQQ CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH QQIDQAREKLGKLKLKYPQLEHSESHMVFGQPRQEIHKLAKSEACDLIVVGSHGRHGLAL HHHHHHHHHHCCEEECCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCCCCEEE LLGSTANDVLHGAPCDVLAVSLKKPE EECCCCCHHHCCCCHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]