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The map label for this gene is yfhH [C]

Identifier: 66046504

GI number: 66046504

Start: 3922978

End: 3923841

Strand: Direct

Name: yfhH [C]

Synonym: Psyr_3275

Alternate gene names: 66046504

Gene position: 3922978-3923841 (Clockwise)

Preceding gene: 66046488

Following gene: 66046508

Centisome position: 64.38

GC content: 59.61

Gene sequence:

>864_bases
ATGCCGCCGAACAGTGCCGAAGGCTTGTTGCGGCTGATCACTGAAGAATACGAAGGCCTGCCACGCCAGCTCAAGCGGAT
CGCCAGCTATATGAGCCAGCAGAGCGACCGGATCATGGTTGACCGGATCAGCGACATCGCCCGCGAGTGCGAAGTCCACC
CCTCGGCCATCGTGCGATTTTCCCAGCGCTTCGGGTTCAGTGGCTTCAGCGAGATGCAGGCGTTGTTTCGCGAGGCTTAT
ACGCACAAGACCACGCCGGTGCAGAATTACCAGCAGCGTATCCGCAGCCTTATCGCCAATAAGTCACAGAAAGCCAACGC
AGGCGATCTGGCACGCGAATGCGTCAGCGCCACCCTCTCCGGCCTGGAACGCCTGAGTGTCGAGCTGGATGACGATGAAT
TCGAAAAGGCCGTGGACCTGGTGGTCAACGCCGACAACATCTATGTGGTGGGTGTGCGCCGTTCATTCGCGGTGGCTGAT
TATCTGGTCTACAACCTGCAACACACCAACAAGCGCATTCACCTGATCTCCGGCCTGGGCGGCAGCTATCGCGAGCAAAT
GCGCAGTGTGCGCGCTGATGATCTGGTGATTGCCATCAGCTTCACGCCCTATGGCAAGGAGACCCAGCACTGCCTGCGCA
TCGCCCAGCACCATCAGGCCAAGACGCTGATCATCACCGACAGCAACCTGTCGCCGCTGGCCAAGCGCGCCAACTCGGTG
TTGCTGGTCAACGAGGGCAGCTCGTTCGCCTTCCGCTCGCTGAGCGCCACGCTATGCCTGTGCCAGGCACTGTTCATCGC
CGTGGCCTATCGCCTGGAACTCAAGGTCGACGAAATACACGAGCAGGTCGGCTTTGATGATTGA

Upstream 100 bases:

>100_bases
GGCATTGCCCTGCACGCCGTCGCCCTGAAAAAGAACAAGCAGAAAGGATGTGAATATGACCAGCGCCGATCAGCCCACTC
TGCCCGGGACGAGCGTCGAC

Downstream 100 bases:

>100_bases
GGGCTGAGCCCTCAGGACTTGGCTTCCTCGCCCATGCGCTGCTGGTTCTTCTCGCCCATCTTCTTCGCGCGTTTTTCCAG
CACCAGATACACCACCAGTG

Product: helix-turn-helix protein RpiR:sugar isomerase (SIS)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MPPNSAEGLLRLITEEYEGLPRQLKRIASYMSQQSDRIMVDRISDIARECEVHPSAIVRFSQRFGFSGFSEMQALFREAY
THKTTPVQNYQQRIRSLIANKSQKANAGDLARECVSATLSGLERLSVELDDDEFEKAVDLVVNADNIYVVGVRRSFAVAD
YLVYNLQHTNKRIHLISGLGGSYREQMRSVRADDLVIAISFTPYGKETQHCLRIAQHHQAKTLIITDSNLSPLAKRANSV
LLVNEGSSFAFRSLSATLCLCQALFIAVAYRLELKVDEIHEQVGFDD

Sequences:

>Translated_287_residues
MPPNSAEGLLRLITEEYEGLPRQLKRIASYMSQQSDRIMVDRISDIARECEVHPSAIVRFSQRFGFSGFSEMQALFREAY
THKTTPVQNYQQRIRSLIANKSQKANAGDLARECVSATLSGLERLSVELDDDEFEKAVDLVVNADNIYVVGVRRSFAVAD
YLVYNLQHTNKRIHLISGLGGSYREQMRSVRADDLVIAISFTPYGKETQHCLRIAQHHQAKTLIITDSNLSPLAKRANSV
LLVNEGSSFAFRSLSATLCLCQALFIAVAYRLELKVDEIHEQVGFDD
>Mature_286_residues
PPNSAEGLLRLITEEYEGLPRQLKRIASYMSQQSDRIMVDRISDIARECEVHPSAIVRFSQRFGFSGFSEMQALFREAYT
HKTTPVQNYQQRIRSLIANKSQKANAGDLARECVSATLSGLERLSVELDDDEFEKAVDLVVNADNIYVVGVRRSFAVADY
LVYNLQHTNKRIHLISGLGGSYREQMRSVRADDLVIAISFTPYGKETQHCLRIAQHHQAKTLIITDSNLSPLAKRANSVL
LVNEGSSFAFRSLSATLCLCQALFIAVAYRLELKVDEIHEQVGFDD

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 32318; Mature: 32187

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPNSAEGLLRLITEEYEGLPRQLKRIASYMSQQSDRIMVDRISDIARECEVHPSAIVRF
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
SQRFGFSGFSEMQALFREAYTHKTTPVQNYQQRIRSLIANKSQKANAGDLARECVSATLS
HHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GLERLSVELDDDEFEKAVDLVVNADNIYVVGVRRSFAVADYLVYNLQHTNKRIHLISGLG
HHHHHEEECCHHHHHHHHHHEEECCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC
GSYREQMRSVRADDLVIAISFTPYGKETQHCLRIAQHHQAKTLIITDSNLSPLAKRANSV
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCE
LLVNEGSSFAFRSLSATLCLCQALFIAVAYRLELKVDEIHEQVGFDD
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PPNSAEGLLRLITEEYEGLPRQLKRIASYMSQQSDRIMVDRISDIARECEVHPSAIVRF
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
SQRFGFSGFSEMQALFREAYTHKTTPVQNYQQRIRSLIANKSQKANAGDLARECVSATLS
HHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GLERLSVELDDDEFEKAVDLVVNADNIYVVGVRRSFAVADYLVYNLQHTNKRIHLISGLG
HHHHHEEECCHHHHHHHHHHEEECCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCC
GSYREQMRSVRADDLVIAISFTPYGKETQHCLRIAQHHQAKTLIITDSNLSPLAKRANSV
HHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCE
LLVNEGSSFAFRSLSATLCLCQALFIAVAYRLELKVDEIHEQVGFDD
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8177218; 11792842 [H]