| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046464
Identifier: 66046464
GI number: 66046464
Start: 3874237
End: 3874518
Strand: Reverse
Name: 66046464
Synonym: Psyr_3235
Alternate gene names: NA
Gene position: 3874518-3874237 (Counterclockwise)
Preceding gene: 66046465
Following gene: 66046463
Centisome position: 63.58
GC content: 57.09
Gene sequence:
>282_bases ATGAACCGTATGCTTGCCCTTGCGCTTGTCCTGACATTCACTGTTGCGCTGGTTTCCGGCTGCTCCACTCACCATGCTGT CGAGCAGCGGGCGTTCAGCGCTGAAGAAAGTCATCAGTTGGCCCTTGAAGACCTCAACCGTCGCGGCCTGTCATTTGATG AGTACCAGGCGCGCAAGGCGCAATTGATGGCAGATCCGCAGATCCAGCAGGCGCGGGACTTCGATGAAAAAGGCGAAACG AGCGTCGATCTGGGTGTCACCGGTCAGCAGCCACAAGGTTAA
Upstream 100 bases:
>100_bases AACAGTCGATAGCGACTATCACGGCGGATGATTTTTGCTGTGTCAGGGGCAGGCGTAACCTTGCTTCATTCCTGAAATGA AGCCCCACCGGAGGCCCCCG
Downstream 100 bases:
>100_bases CAGTCTGACTGAAAAGTGCTTTGCGTAAAAACTGTACTGCAGTAATTGGCTGTCAACTGTCCGTGTGTTTCCTGCACCGC CTTCGATAGGGTGAGTACCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MNRMLALALVLTFTVALVSGCSTHHAVEQRAFSAEESHQLALEDLNRRGLSFDEYQARKAQLMADPQIQQARDFDEKGET SVDLGVTGQQPQG
Sequences:
>Translated_93_residues MNRMLALALVLTFTVALVSGCSTHHAVEQRAFSAEESHQLALEDLNRRGLSFDEYQARKAQLMADPQIQQARDFDEKGET SVDLGVTGQQPQG >Mature_93_residues MNRMLALALVLTFTVALVSGCSTHHAVEQRAFSAEESHQLALEDLNRRGLSFDEYQARKAQLMADPQIQQARDFDEKGET SVDLGVTGQQPQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10275; Mature: 10275
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRMLALALVLTFTVALVSGCSTHHAVEQRAFSAEESHQLALEDLNRRGLSFDEYQARKA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH QLMADPQIQQARDFDEKGETSVDLGVTGQQPQG HHHCCCCHHHHHCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MNRMLALALVLTFTVALVSGCSTHHAVEQRAFSAEESHQLALEDLNRRGLSFDEYQARKA CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHH QLMADPQIQQARDFDEKGETSVDLGVTGQQPQG HHHCCCCHHHHHCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA