Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is eamB [H]

Identifier: 66046463

GI number: 66046463

Start: 3873504

End: 3874112

Strand: Reverse

Name: eamB [H]

Synonym: Psyr_3234

Alternate gene names: 66046463

Gene position: 3874112-3873504 (Counterclockwise)

Preceding gene: 66046464

Following gene: 66046449

Centisome position: 63.58

GC content: 58.29

Gene sequence:

>609_bases
ATGGTTCTCTCTTTCGATTTGCTTCTGGCATTCACACTCTTCGCGTTCGTCACCTCCATTACTCCCGGCCCCAACAACAT
GATGCTGCTGGCCTCGGGCGTGAATTTCGGTTTCAGTCGCACCCTGCCGCACATGCTGGGTATCAGTGTCGGTTTTTTCG
TTCTGGTGCTGGCCGTCGGCTTCGGTCTGGGCAGTGTGTTCAAGGCCTGGCCGGTTCTCTATACGATCCTGCGCTACGTG
GGCGCTGCCTATCTGCTGTACCTGGCCTGGAAAATCGCCACCTCGGGGCCGGCCTCCGATAGCCTCGACAGCGAGGGCAA
GCCGCTGAGTTTCATGAGCGCCGCGCTCTTTCAATGGGTCAATCCCAAGGCCTGGATCATGGCGATCGGCGCGATCAGCA
CGTACACCCCCATGCAGGGCTACTTCTACAACGTGGTGGTGATTTCGGCAGTGTTTGCGCTGATCAACCTGCCCAGCGTG
GGCGTCTGGGCAGGCTTTGGCAGTTTGCTGCGCAATGTGCTGCGCGATCCGCTCGGGTTACGTATTTTCAACGGCGTCAT
GGCAGCGCTGTTGGTGGCCTCGCTGTATCCGTTGTTTATCGAACATTGA

Upstream 100 bases:

>100_bases
GTAAAAACTGTACTGCAGTAATTGGCTGTCAACTGTCCGTGTGTTTCCTGCACCGCCTTCGATAGGGTGAGTACCTGACT
CACTGATCCGGACAGGCAGC

Downstream 100 bases:

>100_bases
TTCCGGGGATATTCCGGGGCTACAACGCCAGCTGCAAATGTCCGCCAGCCTGCTTGTGACGCGCCTGCAAGCGGCGTTGC
AGGCCGTGATGGAAATGCTC

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVLSFDLLLAFTLFAFVTSITPGPNNMMLLASGVNFGFSRTLPHMLGISVGFFVLVLAVGFGLGSVFKAWPVLYTILRYV
GAAYLLYLAWKIATSGPASDSLDSEGKPLSFMSAALFQWVNPKAWIMAIGAISTYTPMQGYFYNVVVISAVFALINLPSV
GVWAGFGSLLRNVLRDPLGLRIFNGVMAALLVASLYPLFIEH

Sequences:

>Translated_202_residues
MVLSFDLLLAFTLFAFVTSITPGPNNMMLLASGVNFGFSRTLPHMLGISVGFFVLVLAVGFGLGSVFKAWPVLYTILRYV
GAAYLLYLAWKIATSGPASDSLDSEGKPLSFMSAALFQWVNPKAWIMAIGAISTYTPMQGYFYNVVVISAVFALINLPSV
GVWAGFGSLLRNVLRDPLGLRIFNGVMAALLVASLYPLFIEH
>Mature_202_residues
MVLSFDLLLAFTLFAFVTSITPGPNNMMLLASGVNFGFSRTLPHMLGISVGFFVLVLAVGFGLGSVFKAWPVLYTILRYV
GAAYLLYLAWKIATSGPASDSLDSEGKPLSFMSAALFQWVNPKAWIMAIGAISTYTPMQGYFYNVVVISAVFALINLPSV
GVWAGFGSLLRNVLRDPLGLRIFNGVMAALLVASLYPLFIEH

Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788932, Length=198, Percent_Identity=34.8484848484849, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21874; Mature: 21874

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSFDLLLAFTLFAFVTSITPGPNNMMLLASGVNFGFSRTLPHMLGISVGFFVLVLAVG
CEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGLGSVFKAWPVLYTILRYVGAAYLLYLAWKIATSGPASDSLDSEGKPLSFMSAALFQWV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC
NPKAWIMAIGAISTYTPMQGYFYNVVVISAVFALINLPSVGVWAGFGSLLRNVLRDPLGL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
RIFNGVMAALLVASLYPLFIEH
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVLSFDLLLAFTLFAFVTSITPGPNNMMLLASGVNFGFSRTLPHMLGISVGFFVLVLAVG
CEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FGLGSVFKAWPVLYTILRYVGAAYLLYLAWKIATSGPASDSLDSEGKPLSFMSAALFQWV
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHC
NPKAWIMAIGAISTYTPMQGYFYNVVVISAVFALINLPSVGVWAGFGSLLRNVLRDPLGL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
RIFNGVMAALLVASLYPLFIEH
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA