| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cbg-1 [H]
Identifier: 66046382
GI number: 66046382
Start: 3777676
End: 3780417
Strand: Direct
Name: cbg-1 [H]
Synonym: Psyr_3153
Alternate gene names: 66046382
Gene position: 3777676-3780417 (Clockwise)
Preceding gene: 66046368
Following gene: 66046385
Centisome position: 61.99
GC content: 58.9
Gene sequence:
>2742_bases ATGAACAAGCGAAAGATGATGGGCGCGCACTCGGCGCTGGCCTTGCTGGCATTGGCAGTATCCCAGGTGCACGCCGCTGA CCCTACCGTACAACAAGGGCGTGAAGATCGCGCCGAAAAAGCCGCACAGAAAACCCTGGCCAAGATGACCATGGAAGAAA AGCTGGCCTACATTGGCGGCACCGGCGGCTGGGACGTCAAGCCACTGACCAATTACGGCGTCCCGCAGATCCACGGCGCT GACGGCGGTGTGGGCGTGCGCTACACCAGCGAAGGCAACGATCAGGGTGTTGTCTACCCGTCCGGCCCTAACCTGGCCGC CACCTTCAACCCGCGTCGTGCCATCGACCTCGGCCGTGCGCTGGGTTATGACACTGCCGTCGGCGGCTACCAGTTCATCA CTGGCCCCGGCGTCAACCTGTACCGCATGCCGTACGGCGGCCGTGCGTTCGAATACCTTTCCGGTGAAGACCCGTTCCTT GGCGCCAGCCTGGCACCGGGCGTCATCAACGGTATCCAGTCTCGTGGTGTATGGGCCAACGCCAAGCACTACGCGGCCAA CGACCAGGAAAGCAACCGCTTCAATCTGAATCAGACAATGCCAGAGCGCGTACTGCGTGAAATGTCGTTGCCTGCGTTCG AATCGTCGTCGAAAAACGGCAATGTGGCGATGATGATGTGTGCCTTCCAGAAGGTGAACGGTGATTTCGCCTGCGAAAGC GACCACCTGATCGCCCAGATCCTGAAGAAGGAATGGGGCTTCAAAGGCTTCGTACAGAGCGACTACAACGCTGTCGTTCA CGGTTTCAACGCTGCCCGCGCCGGTACCGATCTGGACATGATGGGCTACCAGATGAACAGCTCCGTGCTGAAGCCGCATC TGGACGCCGGCGACCTGAGCGCTGCGACCATCGACGACAAGGTCCGCCGCATCCTCAAGCAGATCTACCTGTACAAGTTC GACAGCAAGACGCCGCTGACCACGCACAACATGAACAGCTCGACCAGCAACAAAGTTGCTCTGAACGCTGCGCGTGAAGG TATCGTACTGCTGAAAAACCAGGACAATCTGCTGCCGCTGGACAAGCAGAAAGTCAAGAAAATCGCCGTTGTCGGCACCC TGGCCAAGTACTCGCCACCGACCGGTTTCGGCAGCGCCAACGTCATGGCCAGCCATTACGTCAGCGAGCTGAGCGGCCTG CAACAGATCGCGCCTAACGCCAAGGTCGACTTCATCGAAGGCCTGTCGCTGGACCCAAGCACCAGTGCCTGGACCACCAC CGACGCAACTGGCAACGAAGTCCAGGGCATGAAGGTCGAGTACTTCAGCAACACCAACTGGTCTGGTGATGCAGCTGTCA CGCGTACCGAGAAGCACGTTGACCTGGACTGGGCCAACGACAAGAACCTGCCGTTCGAAAGCAACACTTCGACGTCCGAT CCGTACGCCAGCAAAGGTTCGACCGCTGGCCAGCTGAATGGCGATACATCGTCGACTTCGATTCGCTACACCGGCAAGGT GACTCCGACCCAGAGCGGCGAGCAGGTGTTCAAGGTGCGTGCCGACGGCGCGGTGCGTCTGTGGGTCAACGGCAAGAAAA TCATCGACAACGGTGACGGCAAGCCGCTTCCGGGCAACAGCATTCCGCCAACCATTCCAGAGTTCGCCAAGATCAATCTG GAAGCGGGCCAGTCTTACGACGTGAAGCTCGAGTACTCGCGTCGTGCCGGCTACCTGTCGACCATGGGCGGCCTGGTAGG TGTGCAGTTGAGCTCCGCCTCGCTGAACGCTCCTCAGGACCTGTCCGGTTATGACGCCGTCGTGGTTGCCGTAGGTAACA GCAACGAATACGAAGGTGAAGGTTTCGACCACAGCTTCGATCTGCCTGAGTTCCAGAACGAGCTGATCCAGAACATCGCC AAGGTCAACCCCAATACCGTGGTGACCATGTATGGCGGTACGGGTCTGAAGATGAGCGACTGGATCGAACAGGTTCCAGC AGCGCTGCACGCCTTCTATCCGGGTCAGAACGGTGGTCAGGCCCTGGCCGAGATCCTCTTCGGCAAGGTCAACCCGTCGG GCAAGCTGCCGATCAGTATCGAACGCAACATCGAAGACAACCCGGCCTACGCTTCCTTCCCGAAATTCGACAACCAGAAC ACTCTGACCGACATGGATTACAAGGATGACCTGCTGCTGGGTTATCGCGGTTACGAGAAGAAAGGCATCAAGCCGCTCTA TCCGTTCGGCTACGGTCTGTCGTACACCACGTTCGGCTACAGCAACATCAAGGTCACGCCGGGCGTCGCGGTCGGCAATA CACCGATCAAGGTGTCCTTCGACCTGAGCAACACCGGCAAGGTCGGTGGTTCGGAAGTCGCTCAGCTGTATGTGGGCCAG CAGAACCCGAAAGTCGAGCGTCCGATCAAGGAACTCAAAGGCTACAAGAAGGTGTTCCTCAAGCCGGGTGAAAGCAAGCG TGTGACCATCGAGCTGAATGATCGCTCGCTGGCCTACTTCGATGAGAAGAGCAAGCAGTGGGTGGTCGATGCCGACACCT TCAACATCTCGCTCGGTTCGTCGTCGCAGGACATCCGCCTGAACGCCAAGCTGGTCAACTCGTTCCGTCAGGAACTGTCG ACCACCAGCAGCAACCCGCTGCCACGCTCCGCTCTGAACTCGGTCCTGGTCGAGAAACCACCGGTCAAGACCGGCGGTGT ATTCAAGCAGACCGTTGAGTAA
Upstream 100 bases:
>100_bases TTGACCCAAGAAAAGTTGGCCGAAAGCGATAAATAAGAACGCATTTATCCTGCGCACGTGCGCAGGCAGACAGTTATTTG AAACGCAGTTGGAGAGCAAT
Downstream 100 bases:
>100_bases GCGTTAGCTGACTGAAGGGTAAACGGACAAATAAAGGCTCAGGGACGAGCCCTTACCGCTGCATCGACCTGCGCAATGTA GGTATCGAAACACTCGACCA
Product: Beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MNKRKMMGAHSALALLALAVSQVHAADPTVQQGREDRAEKAAQKTLAKMTMEEKLAYIGGTGGWDVKPLTNYGVPQIHGA DGGVGVRYTSEGNDQGVVYPSGPNLAATFNPRRAIDLGRALGYDTAVGGYQFITGPGVNLYRMPYGGRAFEYLSGEDPFL GASLAPGVINGIQSRGVWANAKHYAANDQESNRFNLNQTMPERVLREMSLPAFESSSKNGNVAMMMCAFQKVNGDFACES DHLIAQILKKEWGFKGFVQSDYNAVVHGFNAARAGTDLDMMGYQMNSSVLKPHLDAGDLSAATIDDKVRRILKQIYLYKF DSKTPLTTHNMNSSTSNKVALNAAREGIVLLKNQDNLLPLDKQKVKKIAVVGTLAKYSPPTGFGSANVMASHYVSELSGL QQIAPNAKVDFIEGLSLDPSTSAWTTTDATGNEVQGMKVEYFSNTNWSGDAAVTRTEKHVDLDWANDKNLPFESNTSTSD PYASKGSTAGQLNGDTSSTSIRYTGKVTPTQSGEQVFKVRADGAVRLWVNGKKIIDNGDGKPLPGNSIPPTIPEFAKINL EAGQSYDVKLEYSRRAGYLSTMGGLVGVQLSSASLNAPQDLSGYDAVVVAVGNSNEYEGEGFDHSFDLPEFQNELIQNIA KVNPNTVVTMYGGTGLKMSDWIEQVPAALHAFYPGQNGGQALAEILFGKVNPSGKLPISIERNIEDNPAYASFPKFDNQN TLTDMDYKDDLLLGYRGYEKKGIKPLYPFGYGLSYTTFGYSNIKVTPGVAVGNTPIKVSFDLSNTGKVGGSEVAQLYVGQ QNPKVERPIKELKGYKKVFLKPGESKRVTIELNDRSLAYFDEKSKQWVVDADTFNISLGSSSQDIRLNAKLVNSFRQELS TTSSNPLPRSALNSVLVEKPPVKTGGVFKQTVE
Sequences:
>Translated_913_residues MNKRKMMGAHSALALLALAVSQVHAADPTVQQGREDRAEKAAQKTLAKMTMEEKLAYIGGTGGWDVKPLTNYGVPQIHGA DGGVGVRYTSEGNDQGVVYPSGPNLAATFNPRRAIDLGRALGYDTAVGGYQFITGPGVNLYRMPYGGRAFEYLSGEDPFL GASLAPGVINGIQSRGVWANAKHYAANDQESNRFNLNQTMPERVLREMSLPAFESSSKNGNVAMMMCAFQKVNGDFACES DHLIAQILKKEWGFKGFVQSDYNAVVHGFNAARAGTDLDMMGYQMNSSVLKPHLDAGDLSAATIDDKVRRILKQIYLYKF DSKTPLTTHNMNSSTSNKVALNAAREGIVLLKNQDNLLPLDKQKVKKIAVVGTLAKYSPPTGFGSANVMASHYVSELSGL QQIAPNAKVDFIEGLSLDPSTSAWTTTDATGNEVQGMKVEYFSNTNWSGDAAVTRTEKHVDLDWANDKNLPFESNTSTSD PYASKGSTAGQLNGDTSSTSIRYTGKVTPTQSGEQVFKVRADGAVRLWVNGKKIIDNGDGKPLPGNSIPPTIPEFAKINL EAGQSYDVKLEYSRRAGYLSTMGGLVGVQLSSASLNAPQDLSGYDAVVVAVGNSNEYEGEGFDHSFDLPEFQNELIQNIA KVNPNTVVTMYGGTGLKMSDWIEQVPAALHAFYPGQNGGQALAEILFGKVNPSGKLPISIERNIEDNPAYASFPKFDNQN TLTDMDYKDDLLLGYRGYEKKGIKPLYPFGYGLSYTTFGYSNIKVTPGVAVGNTPIKVSFDLSNTGKVGGSEVAQLYVGQ QNPKVERPIKELKGYKKVFLKPGESKRVTIELNDRSLAYFDEKSKQWVVDADTFNISLGSSSQDIRLNAKLVNSFRQELS TTSSNPLPRSALNSVLVEKPPVKTGGVFKQTVE >Mature_913_residues MNKRKMMGAHSALALLALAVSQVHAADPTVQQGREDRAEKAAQKTLAKMTMEEKLAYIGGTGGWDVKPLTNYGVPQIHGA DGGVGVRYTSEGNDQGVVYPSGPNLAATFNPRRAIDLGRALGYDTAVGGYQFITGPGVNLYRMPYGGRAFEYLSGEDPFL GASLAPGVINGIQSRGVWANAKHYAANDQESNRFNLNQTMPERVLREMSLPAFESSSKNGNVAMMMCAFQKVNGDFACES DHLIAQILKKEWGFKGFVQSDYNAVVHGFNAARAGTDLDMMGYQMNSSVLKPHLDAGDLSAATIDDKVRRILKQIYLYKF DSKTPLTTHNMNSSTSNKVALNAAREGIVLLKNQDNLLPLDKQKVKKIAVVGTLAKYSPPTGFGSANVMASHYVSELSGL QQIAPNAKVDFIEGLSLDPSTSAWTTTDATGNEVQGMKVEYFSNTNWSGDAAVTRTEKHVDLDWANDKNLPFESNTSTSD PYASKGSTAGQLNGDTSSTSIRYTGKVTPTQSGEQVFKVRADGAVRLWVNGKKIIDNGDGKPLPGNSIPPTIPEFAKINL EAGQSYDVKLEYSRRAGYLSTMGGLVGVQLSSASLNAPQDLSGYDAVVVAVGNSNEYEGEGFDHSFDLPEFQNELIQNIA KVNPNTVVTMYGGTGLKMSDWIEQVPAALHAFYPGQNGGQALAEILFGKVNPSGKLPISIERNIEDNPAYASFPKFDNQN TLTDMDYKDDLLLGYRGYEKKGIKPLYPFGYGLSYTTFGYSNIKVTPGVAVGNTPIKVSFDLSNTGKVGGSEVAQLYVGQ QNPKVERPIKELKGYKKVFLKPGESKRVTIELNDRSLAYFDEKSKQWVVDADTFNISLGSSSQDIRLNAKLVNSFRQELS TTSSNPLPRSALNSVLVEKPPVKTGGVFKQTVE
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=269, Percent_Identity=31.9702602230483, Blast_Score=139, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 98952; Mature: 98952
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRKMMGAHSALALLALAVSQVHAADPTVQQGREDRAEKAAQKTLAKMTMEEKLAYIGG CCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECC TGGWDVKPLTNYGVPQIHGADGGVGVRYTSEGNDQGVVYPSGPNLAATFNPRRAIDLGRA CCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCEEEECCCHHHHHHHHH LGYDTAVGGYQFITGPGVNLYRMPYGGRAFEYLSGEDPFLGASLAPGVINGIQSRGVWAN CCCCCCCCCEEEEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC AKHYAANDQESNRFNLNQTMPERVLREMSLPAFESSSKNGNVAMMMCAFQKVNGDFACES CCCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCCEECCC DHLIAQILKKEWGFKGFVQSDYNAVVHGFNAARAGTDLDMMGYQMNSSVLKPHLDAGDLS CHHHHHHHHHHCCCCCCCCCCCHHEEECCHHHCCCCCHHHHCEECCCHHHCCCCCCCCCC AATIDDKVRRILKQIYLYKFDSKTPLTTHNMNSSTSNKVALNAAREGIVLLKNQDNLLPL HHHHHHHHHHHHHHHHEEEECCCCCCEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCC DKQKVKKIAVVGTLAKYSPPTGFGSANVMASHYVSELSGLQQIAPNAKVDFIEGLSLDPS CHHHHHEEHEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC TSAWTTTDATGNEVQGMKVEYFSNTNWSGDAAVTRTEKHVDLDWANDKNLPFESNTSTSD CCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC PYASKGSTAGQLNGDTSSTSIRYTGKVTPTQSGEQVFKVRADGAVRLWVNGKKIIDNGDG CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEEEECCEEEEECCCC KPLPGNSIPPTIPEFAKINLEAGQSYDVKLEYSRRAGYLSTMGGLVGVQLSSASLNAPQD CCCCCCCCCCCCCHHHEEEECCCCCEEEEEEECCCCCHHHHHCCEEEEEEECCCCCCCCC LSGYDAVVVAVGNSNEYEGEGFDHSFDLPEFQNELIQNIAKVNPNTVVTMYGGTGLKMSD CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH WIEQVPAALHAFYPGQNGGQALAEILFGKVNPSGKLPISIERNIEDNPAYASFPKFDNQN HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC TLTDMDYKDDLLLGYRGYEKKGIKPLYPFGYGLSYTTFGYSNIKVTPGVAVGNTPIKVSF CEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCEEECCCCEEEEE DLSNTGKVGGSEVAQLYVGQQNPKVERPIKELKGYKKVFLKPGESKRVTIELNDRSLAYF ECCCCCCCCHHHHHEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEE DEKSKQWVVDADTFNISLGSSSQDIRLNAKLVNSFRQELSTTSSNPLPRSALNSVLVEKP ECCCCEEEEECCEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC PVKTGGVFKQTVE CCCCCCCCHHCCC >Mature Secondary Structure MNKRKMMGAHSALALLALAVSQVHAADPTVQQGREDRAEKAAQKTLAKMTMEEKLAYIGG CCCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECC TGGWDVKPLTNYGVPQIHGADGGVGVRYTSEGNDQGVVYPSGPNLAATFNPRRAIDLGRA CCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCEEEEECCCCEEEECCCHHHHHHHHH LGYDTAVGGYQFITGPGVNLYRMPYGGRAFEYLSGEDPFLGASLAPGVINGIQSRGVWAN CCCCCCCCCEEEEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCC AKHYAANDQESNRFNLNQTMPERVLREMSLPAFESSSKNGNVAMMMCAFQKVNGDFACES CCCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHCCCCEECCC DHLIAQILKKEWGFKGFVQSDYNAVVHGFNAARAGTDLDMMGYQMNSSVLKPHLDAGDLS CHHHHHHHHHHCCCCCCCCCCCHHEEECCHHHCCCCCHHHHCEECCCHHHCCCCCCCCCC AATIDDKVRRILKQIYLYKFDSKTPLTTHNMNSSTSNKVALNAAREGIVLLKNQDNLLPL HHHHHHHHHHHHHHHHEEEECCCCCCEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCC DKQKVKKIAVVGTLAKYSPPTGFGSANVMASHYVSELSGLQQIAPNAKVDFIEGLSLDPS CHHHHHEEHEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC TSAWTTTDATGNEVQGMKVEYFSNTNWSGDAAVTRTEKHVDLDWANDKNLPFESNTSTSD CCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC PYASKGSTAGQLNGDTSSTSIRYTGKVTPTQSGEQVFKVRADGAVRLWVNGKKIIDNGDG CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCEEEEEECCEEEEECCCC KPLPGNSIPPTIPEFAKINLEAGQSYDVKLEYSRRAGYLSTMGGLVGVQLSSASLNAPQD CCCCCCCCCCCCCHHHEEEECCCCCEEEEEEECCCCCHHHHHCCEEEEEEECCCCCCCCC LSGYDAVVVAVGNSNEYEGEGFDHSFDLPEFQNELIQNIAKVNPNTVVTMYGGTGLKMSD CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH WIEQVPAALHAFYPGQNGGQALAEILFGKVNPSGKLPISIERNIEDNPAYASFPKFDNQN HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC TLTDMDYKDDLLLGYRGYEKKGIKPLYPFGYGLSYTTFGYSNIKVTPGVAVGNTPIKVSF CEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCEEECCCCEEEEE DLSNTGKVGGSEVAQLYVGQQNPKVERPIKELKGYKKVFLKPGESKRVTIELNDRSLAYF ECCCCCCCCHHHHHEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCEEEEEECCCEEEEE DEKSKQWVVDADTFNISLGSSSQDIRLNAKLVNSFRQELSTTSSNPLPRSALNSVLVEKP ECCCCEEEEECCEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC PVKTGGVFKQTVE CCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]