| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046371
Identifier: 66046371
GI number: 66046371
Start: 3769113
End: 3769643
Strand: Reverse
Name: 66046371
Synonym: Psyr_3142
Alternate gene names: NA
Gene position: 3769643-3769113 (Counterclockwise)
Preceding gene: 66046372
Following gene: 66046370
Centisome position: 61.86
GC content: 63.47
Gene sequence:
>531_bases ATGATCGGTTCATTACGTCCGCTGGAGTGGGCATTGCTGGCTTTCGCTGCAGTGCTGGCAGCCTTGATCGCACTGGTCTT CAGCGGCGCTGCGCACTCACCGGACTGGCTGCCCGAGCAGGCACCGCGCAACCCGGTCGATCAGAGGGCCCAGGTCCACA GTGCGCCGTCGGCGACACTCGACAGCCTCGCCAATACCTGGAAAACCCCGCTGTTCAGTCCGGATCGCAGCCCTGACGTG GCCGTTCGCAAAGCCGATGCACAAGCCAGCAATCTGGCTGGCCTGACCCTGACCGGAGTGATCATGGACGGCTCCTTGCG TGTGGCATTGCTCAAGCAGGCCAGCGGTCCGGCATTGAAAGTCCGTCAGGGCGATCGCTTGCCCAATGGCTGGACGCTGG ACCGTCTGGAGCCGACCCAGGCTACGTTCAAACTCGATGACCGCACGCAAGTCCTGCGCCTGCCCGCGCTGCGTCTGCCG CCGCCGTCGAATACACCGCCGATTACCTTAACCAACGATTCCACCCTGTGA
Upstream 100 bases:
>100_bases GCGACGCCAACGCTCCGGCCAGCGGTGCTGCCGGCAAACTGGTGGTGCATCTGCTGGTGCGCGGCTACCTGCAACCGGCC AGTGCCGGGGAGGGCGAGCA
Downstream 100 bases:
>100_bases TGGGTACCTTTTCTGGAGTTCCTGCCATCGCTACCTTGCGCACACCCTTGCTTTGCCTGGCCACCGCCGTCGCCCTTGGC GGCTGCGCGTCACAGTCAGA
Product: general secretion pathway protein N, putative
Products: NA
Alternate protein names: General Secretion Pathway Protein GspN
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MIGSLRPLEWALLAFAAVLAALIALVFSGAAHSPDWLPEQAPRNPVDQRAQVHSAPSATLDSLANTWKTPLFSPDRSPDV AVRKADAQASNLAGLTLTGVIMDGSLRVALLKQASGPALKVRQGDRLPNGWTLDRLEPTQATFKLDDRTQVLRLPALRLP PPSNTPPITLTNDSTL
Sequences:
>Translated_176_residues MIGSLRPLEWALLAFAAVLAALIALVFSGAAHSPDWLPEQAPRNPVDQRAQVHSAPSATLDSLANTWKTPLFSPDRSPDV AVRKADAQASNLAGLTLTGVIMDGSLRVALLKQASGPALKVRQGDRLPNGWTLDRLEPTQATFKLDDRTQVLRLPALRLP PPSNTPPITLTNDSTL >Mature_176_residues MIGSLRPLEWALLAFAAVLAALIALVFSGAAHSPDWLPEQAPRNPVDQRAQVHSAPSATLDSLANTWKTPLFSPDRSPDV AVRKADAQASNLAGLTLTGVIMDGSLRVALLKQASGPALKVRQGDRLPNGWTLDRLEPTQATFKLDDRTQVLRLPALRLP PPSNTPPITLTNDSTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18851; Mature: 18851
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGSLRPLEWALLAFAAVLAALIALVFSGAAHSPDWLPEQAPRNPVDQRAQVHSAPSATL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH DSLANTWKTPLFSPDRSPDVAVRKADAQASNLAGLTLTGVIMDGSLRVALLKQASGPALK HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCEEE VRQGDRLPNGWTLDRLEPTQATFKLDDRTQVLRLPALRLPPPSNTPPITLTNDSTL EECCCCCCCCCCCCCCCCCCEEEEECCCHHEEECCCEECCCCCCCCCEEECCCCCC >Mature Secondary Structure MIGSLRPLEWALLAFAAVLAALIALVFSGAAHSPDWLPEQAPRNPVDQRAQVHSAPSATL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHH DSLANTWKTPLFSPDRSPDVAVRKADAQASNLAGLTLTGVIMDGSLRVALLKQASGPALK HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCEEE VRQGDRLPNGWTLDRLEPTQATFKLDDRTQVLRLPALRLPPPSNTPPITLTNDSTL EECCCCCCCCCCCCCCCCCCEEEEECCCHHEEECCCEECCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA