Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is ypfH [C]

Identifier: 66046369

GI number: 66046369

Start: 3765986

End: 3766708

Strand: Reverse

Name: ypfH [C]

Synonym: Psyr_3140

Alternate gene names: 66046369

Gene position: 3766708-3765986 (Counterclockwise)

Preceding gene: 66046370

Following gene: 66046366

Centisome position: 61.81

GC content: 58.09

Gene sequence:

>723_bases
ATGCTGAAATTTTTCGCTGCCTTACTGTTTGCCGTTACCGCAATGGCGCAGGCGCAGGACACCTTGCACACGGACCTGCC
GCTCGATTATCTGGCGCAGACCAATGTCGACAAGCCTGACCAGCCGCTGGTGATTTTCATCCACGGCTACGGCAGCAATG
CCGCCGACCTGTTCGGGCTCAAGGAAGAGCTTCCGGCCGACTACAACTATGTGTCGGTACAGGCGCCGATGGAGTTGCGT
GCTGACAGCTACAAGTGGTTCACCCAGAAGCCCGGCGTCGCGGATTATGACGGTGTGACCGAAGACCTGAAAAGCAGCGG
TACCCGGTTGGCTGCGTTCATCGGCAAAGCCACTGAGAAGTTTCATACCCAGCCAGGCAAGGTCTTCCTGATCGGTTTCA
GCCAGGGCGCAATGATGAGTTATGAAGTCGCCCTGCGACAGCCAAAACTGGTCGGCGGTTTTGCGGCATTGAGCGGACGG
CTGCTGCCGGTCGTGAAGTCCGAGGTCAAAACCTCCGACGACCTCAAGGCCCTGAGCGTATTCATCGGTCACGGCACCCA
GGATCGCCAGGTAGCCTATGCCAGTGCACCGCAAGCCGAGGCGACGTTGAAAACGCTCGGTCTGACGCCACAGTTACATG
CCTATGAAGGCATGGGGCACAGCATCAACGAGGCTGAAGTGATGGATCTGGCGGCTTGGTTGAAGCAGTCAAACCGCCAG
TGA

Upstream 100 bases:

>100_bases
TCTCGCGGACCAGCATGCAGAACTGACGCCGGTTGATTGCTGCCACCACGCCCACTCACGACGCTGCCTTTGGGCGGCGT
CAAACAGAGGTCATGAACAG

Downstream 100 bases:

>100_bases
ATACGTGCGTCGTCCGAGGGGGCGACGCTCAATCTTCGGTCAACTAGTTGACCTTGACCTCGTTGAACTTGAGCACGTTG
TCCTTGTTCTCGCGATCGCG

Product: phospholipase/carboxylesterase

Products: NA

Alternate protein names: Phospholipase/Carboxylesterase Family Protein; Serine Esterase; Carboxylesterase; Esterase; Phospholipase/Carboxylesterase Superfamily Protein; Phospholipase / Carboxylesterase; COBF Protein; Phospholipase/Carboxylesterase Superfamily

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MLKFFAALLFAVTAMAQAQDTLHTDLPLDYLAQTNVDKPDQPLVIFIHGYGSNAADLFGLKEELPADYNYVSVQAPMELR
ADSYKWFTQKPGVADYDGVTEDLKSSGTRLAAFIGKATEKFHTQPGKVFLIGFSQGAMMSYEVALRQPKLVGGFAALSGR
LLPVVKSEVKTSDDLKALSVFIGHGTQDRQVAYASAPQAEATLKTLGLTPQLHAYEGMGHSINEAEVMDLAAWLKQSNRQ

Sequences:

>Translated_240_residues
MLKFFAALLFAVTAMAQAQDTLHTDLPLDYLAQTNVDKPDQPLVIFIHGYGSNAADLFGLKEELPADYNYVSVQAPMELR
ADSYKWFTQKPGVADYDGVTEDLKSSGTRLAAFIGKATEKFHTQPGKVFLIGFSQGAMMSYEVALRQPKLVGGFAALSGR
LLPVVKSEVKTSDDLKALSVFIGHGTQDRQVAYASAPQAEATLKTLGLTPQLHAYEGMGHSINEAEVMDLAAWLKQSNRQ
>Mature_240_residues
MLKFFAALLFAVTAMAQAQDTLHTDLPLDYLAQTNVDKPDQPLVIFIHGYGSNAADLFGLKEELPADYNYVSVQAPMELR
ADSYKWFTQKPGVADYDGVTEDLKSSGTRLAAFIGKATEKFHTQPGKVFLIGFSQGAMMSYEVALRQPKLVGGFAALSGR
LLPVVKSEVKTSDDLKALSVFIGHGTQDRQVAYASAPQAEATLKTLGLTPQLHAYEGMGHSINEAEVMDLAAWLKQSNRQ

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.-.- [C]

Molecular weight: Translated: 26161; Mature: 26161

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFFAALLFAVTAMAQAQDTLHTDLPLDYLAQTNVDKPDQPLVIFIHGYGSNAADLFGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCC
KEELPADYNYVSVQAPMELRADSYKWFTQKPGVADYDGVTEDLKSSGTRLAAFIGKATEK
HHHCCCCCCEEEEECCHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHH
FHTQPGKVFLIGFSQGAMMSYEVALRQPKLVGGFAALSGRLLPVVKSEVKTSDDLKALSV
HCCCCCEEEEEEECCCCEEEEEHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
FIGHGTQDRQVAYASAPQAEATLKTLGLTPQLHAYEGMGHSINEAEVMDLAAWLKQSNRQ
HCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKFFAALLFAVTAMAQAQDTLHTDLPLDYLAQTNVDKPDQPLVIFIHGYGSNAADLFGL
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCC
KEELPADYNYVSVQAPMELRADSYKWFTQKPGVADYDGVTEDLKSSGTRLAAFIGKATEK
HHHCCCCCCEEEEECCHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCEEHHHHHHHHHH
FHTQPGKVFLIGFSQGAMMSYEVALRQPKLVGGFAALSGRLLPVVKSEVKTSDDLKALSV
HCCCCCEEEEEEECCCCEEEEEHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
FIGHGTQDRQVAYASAPQAEATLKTLGLTPQLHAYEGMGHSINEAEVMDLAAWLKQSNRQ
HCCCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA