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The map label for this gene is 66046338

Identifier: 66046338

GI number: 66046338

Start: 3725843

End: 3727546

Strand: Reverse

Name: 66046338

Synonym: Psyr_3109

Alternate gene names: NA

Gene position: 3727546-3725843 (Counterclockwise)

Preceding gene: 66046340

Following gene: 66046335

Centisome position: 61.17

GC content: 60.45

Gene sequence:

>1704_bases
TTGAATACTTCGCCCCTCGACAATCCGTTTTATTACCTGGAAAACTTCCGTCAGGTCCTTGGCTGGATTGCCCGGCGCTA
CGATGACCTGCTCGATGCAACCGAGCGCCGCTTCATCAGCGAGTTTGCCGAATTGCCGGTGCCCGCCCAGGGTTTGCTGG
TGCGCATGGTGATGCGCAAGGGTGTGTTGTTTCGGGCCAGCAAACTCGGTTATGTCGAGATTGGCGATCCTCATGACGCC
GTGCTGCCGCTACTGGCGCGGGAGTGGGTCGACAGCGCTCCGCCACTGGGCTTGAGCGAGCTGTTCCAGCTGCTGCGTCG
GGATGAGTTGAGCCACTGCTTCAAAGACCACGCGGTCAAGGGCCCTGAGCGCAAGCAGGAATGGTTCGAGCGCCTGCAGC
CGATGTACCCGTCGCCGCAGTCCCTTGAACAATGGTACCCGACGTTGTCCGACGCTGTGTTCGGCCTGAAGATCATGCCG
CTGTGTGATCGCCTGCGCTTGCTGTACTTCGGCAATCTGTACCAGGAATGGTCTGAATTCGTGCTGGCTGACCTGGGTAT
CTACCGCTACGAAAAGGTCGAGTTCTCGCTGGAGTCGCGCGGCATCAACCAGCGTGCCGACATTGATGTGTGCCTGCAAT
TGCATGCCTGCCGGGAAGCACTGGAAACCTGCCTGGAGCTGCATGCGCTGGCCGAGCGTGTCATTGCCATCGAGTGCGGC
AATCCGTGGTTGCTGATGCGTCGTGGCAAACTGCTGTTCCGTATCGGGCAACAGGCCGAGCGCATCCAGGACTGGCCTCT
GGCGATGGCGGTGTATCGTCAGTCGAGCTACCCCGGCGCGCGTTCAAGGCAAATCCGCGTGCTGGAGCGCAATGCCGAGT
ATGCAGCGGCGCTGACGCTGGCGGAGCAGGCCCGTCTTGCACCGGAAAGTGATGCGGAGGTCCAGCACCTGTCACGCGTC
TTGCCACGCCTGCAACGCAAGCTCGGCCTGGCGGCGGCGCGCAAGCGCACGGTGCGGGCCATTGCACGGCTGGACGTGCA
GGTCACGCCGGTGTCGGGGATGAGTGTCGAGCGTCTGATACGCCTGCACCTCGAAGCCGAGCAGGGCGGGGAAGTGCATT
ACGTCGAGAATGCGCTGATCAATTCACTGTTCGGGCTGCTGTGCTGGCGAGCCATTTTTGCGCCGTTGCCGGGTGCATTC
TTTCATCCGTTTCACAGTGCGCCGAGTGACCTGTACAGCCCTGACTTCTATCAGCGCAGGGCTGCGTTATTCGATGCCTG
TCTGGTGCAACTGGAGTCGGATGAATACCTGGCGACCATTCGTGAGCATTTTGAAAGCAAATACGGCCTGCAATCACCCT
TCGTATTCTGGGGAGCGCTGACGCCGGAGCTTCTGGAGCAGGCGCTCTATTGCCTGCCGGCAGCGCACTTGCTTCGCTGG
TTTCGTCGCCTGTTGCAGGACATAAAAGCCAACCGGACAGGGATGCCCGACCTGATCCAGTTCTTTCCGCAACAGCGTCG
TTATCGAATGATCGAGGTCAAGGGGCCGGGTGATCGCCTCCAGGACAACCAACTGCGCTGGCTGGACTTCTGTGCCGAGC
ATGGCATGCCGGTGGAGGTGTGTTACGTGCAATGGGCAACTGACGACAGTGCTTGTGTCAGTAGCGACCTGTCAGACCAT
CAAGGGGCCTTGTGCCCGTCCTGA

Upstream 100 bases:

>100_bases
ATTGATCGGCCGAAACACGTTCAGCAGGCGTTTGCGCTGGAATCTGTACGGATAACCAGTATCCTTGTTCAGTCTGCTCA
TTTGTATGTGAACGCTGGCC

Downstream 100 bases:

>100_bases
CTGTCCTGGTGATCTGCATCATGCGGGTGTTTCGAGTCATGAGGCTTGTCATCTGCACTGCCGTTCTTTCCGGGCAAGGG
ATCCATGCCTTTGGTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: VRR-NUC Domain Protein; VRR-NUC Domain Family Protein; Vrr-Nuc Domain Protein; DNA Polymerase III Epsilon Subunit; DNA-Directed DNA Polymerase; Vrr-Nuc DomaiN-Containing Protein

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MNTSPLDNPFYYLENFRQVLGWIARRYDDLLDATERRFISEFAELPVPAQGLLVRMVMRKGVLFRASKLGYVEIGDPHDA
VLPLLAREWVDSAPPLGLSELFQLLRRDELSHCFKDHAVKGPERKQEWFERLQPMYPSPQSLEQWYPTLSDAVFGLKIMP
LCDRLRLLYFGNLYQEWSEFVLADLGIYRYEKVEFSLESRGINQRADIDVCLQLHACREALETCLELHALAERVIAIECG
NPWLLMRRGKLLFRIGQQAERIQDWPLAMAVYRQSSYPGARSRQIRVLERNAEYAAALTLAEQARLAPESDAEVQHLSRV
LPRLQRKLGLAAARKRTVRAIARLDVQVTPVSGMSVERLIRLHLEAEQGGEVHYVENALINSLFGLLCWRAIFAPLPGAF
FHPFHSAPSDLYSPDFYQRRAALFDACLVQLESDEYLATIREHFESKYGLQSPFVFWGALTPELLEQALYCLPAAHLLRW
FRRLLQDIKANRTGMPDLIQFFPQQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATDDSACVSSDLSDH
QGALCPS

Sequences:

>Translated_567_residues
MNTSPLDNPFYYLENFRQVLGWIARRYDDLLDATERRFISEFAELPVPAQGLLVRMVMRKGVLFRASKLGYVEIGDPHDA
VLPLLAREWVDSAPPLGLSELFQLLRRDELSHCFKDHAVKGPERKQEWFERLQPMYPSPQSLEQWYPTLSDAVFGLKIMP
LCDRLRLLYFGNLYQEWSEFVLADLGIYRYEKVEFSLESRGINQRADIDVCLQLHACREALETCLELHALAERVIAIECG
NPWLLMRRGKLLFRIGQQAERIQDWPLAMAVYRQSSYPGARSRQIRVLERNAEYAAALTLAEQARLAPESDAEVQHLSRV
LPRLQRKLGLAAARKRTVRAIARLDVQVTPVSGMSVERLIRLHLEAEQGGEVHYVENALINSLFGLLCWRAIFAPLPGAF
FHPFHSAPSDLYSPDFYQRRAALFDACLVQLESDEYLATIREHFESKYGLQSPFVFWGALTPELLEQALYCLPAAHLLRW
FRRLLQDIKANRTGMPDLIQFFPQQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATDDSACVSSDLSDH
QGALCPS
>Mature_567_residues
MNTSPLDNPFYYLENFRQVLGWIARRYDDLLDATERRFISEFAELPVPAQGLLVRMVMRKGVLFRASKLGYVEIGDPHDA
VLPLLAREWVDSAPPLGLSELFQLLRRDELSHCFKDHAVKGPERKQEWFERLQPMYPSPQSLEQWYPTLSDAVFGLKIMP
LCDRLRLLYFGNLYQEWSEFVLADLGIYRYEKVEFSLESRGINQRADIDVCLQLHACREALETCLELHALAERVIAIECG
NPWLLMRRGKLLFRIGQQAERIQDWPLAMAVYRQSSYPGARSRQIRVLERNAEYAAALTLAEQARLAPESDAEVQHLSRV
LPRLQRKLGLAAARKRTVRAIARLDVQVTPVSGMSVERLIRLHLEAEQGGEVHYVENALINSLFGLLCWRAIFAPLPGAF
FHPFHSAPSDLYSPDFYQRRAALFDACLVQLESDEYLATIREHFESKYGLQSPFVFWGALTPELLEQALYCLPAAHLLRW
FRRLLQDIKANRTGMPDLIQFFPQQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEVCYVQWATDDSACVSSDLSDH
QGALCPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI226246523, Length=197, Percent_Identity=31.9796954314721, Blast_Score=83, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17538392, Length=198, Percent_Identity=32.3232323232323, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65359; Mature: 65359

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSPLDNPFYYLENFRQVLGWIARRYDDLLDATERRFISEFAELPVPAQGLLVRMVMRK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GVLFRASKLGYVEIGDPHDAVLPLLAREWVDSAPPLGLSELFQLLRRDELSHCFKDHAVK
CHHEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GPERKQEWFERLQPMYPSPQSLEQWYPTLSDAVFGLKIMPLCDRLRLLYFGNLYQEWSEF
CCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLADLGIYRYEKVEFSLESRGINQRADIDVCLQLHACREALETCLELHALAERVIAIECG
HHHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
NPWLLMRRGKLLFRIGQQAERIQDWPLAMAVYRQSSYPGARSRQIRVLERNAEYAAALTL
CCEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
AEQARLAPESDAEVQHLSRVLPRLQRKLGLAAARKRTVRAIARLDVQVTPVSGMSVERLI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHH
RLHLEAEQGGEVHYVENALINSLFGLLCWRAIFAPLPGAFFHPFHSAPSDLYSPDFYQRR
HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHH
AALFDACLVQLESDEYLATIREHFESKYGLQSPFVFWGALTPELLEQALYCLPAAHLLRW
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHH
FRRLLQDIKANRTGMPDLIQFFPQQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEV
HHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEE
CYVQWATDDSACVSSDLSDHQGALCPS
EEEEECCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSPLDNPFYYLENFRQVLGWIARRYDDLLDATERRFISEFAELPVPAQGLLVRMVMRK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
GVLFRASKLGYVEIGDPHDAVLPLLAREWVDSAPPLGLSELFQLLRRDELSHCFKDHAVK
CHHEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GPERKQEWFERLQPMYPSPQSLEQWYPTLSDAVFGLKIMPLCDRLRLLYFGNLYQEWSEF
CCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLADLGIYRYEKVEFSLESRGINQRADIDVCLQLHACREALETCLELHALAERVIAIECG
HHHHHHHHHHHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
NPWLLMRRGKLLFRIGQQAERIQDWPLAMAVYRQSSYPGARSRQIRVLERNAEYAAALTL
CCEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHH
AEQARLAPESDAEVQHLSRVLPRLQRKLGLAAARKRTVRAIARLDVQVTPVSGMSVERLI
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHH
RLHLEAEQGGEVHYVENALINSLFGLLCWRAIFAPLPGAFFHPFHSAPSDLYSPDFYQRR
HHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHH
AALFDACLVQLESDEYLATIREHFESKYGLQSPFVFWGALTPELLEQALYCLPAAHLLRW
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHH
FRRLLQDIKANRTGMPDLIQFFPQQRRYRMIEVKGPGDRLQDNQLRWLDFCAEHGMPVEV
HHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEE
CYVQWATDDSACVSSDLSDHQGALCPS
EEEEECCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA