| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is baeS [H]
Identifier: 66046314
GI number: 66046314
Start: 3690962
End: 3692137
Strand: Direct
Name: baeS [H]
Synonym: Psyr_3085
Alternate gene names: 66046314
Gene position: 3690962-3692137 (Clockwise)
Preceding gene: 66046313
Following gene: 66046316
Centisome position: 60.57
GC content: 59.95
Gene sequence:
>1176_bases ATGCGACATTTTTTCAGGCACAGACAAAAACCGTTGTGGCACTGGGTCGGCATGCGCATGAGCATGCTCGCCGTCGGTGC GGTCATCGTCATCGCGTTTTGCATGTGGCTGCACGTCACGGTCTCTGACTGGCTCACCCTGCAGGCAATGCCGGCCGACG TGCGCATGGAATTCCTTCGACTGCAGGCCGAGCCCACTCTGGACATGGCCAAGCTGCGCGAACTGTTCGTCGAGTATTAC CCGATCGAAAACCTGCTGCCGGGCATTGCCAACAAGGAATGGTGGGTACTGGCAGCGCTGGTGTCGATCGCGATCCCGAT CATCCTATTCTTCGGCTTTCTGTTTTCCCGTCCGCTTTCAAGCCAGTTTTCCTCGATTGCCAGAGGCGCACGTCAGGTCG CCCAGGGTGATTTCAAGACACGCCTGCCGATGAGCACCAACGGCCCGGACGAACTACAGGCACTGGTCAGCGACTTCAAC ACCATGACCACCCAGCTCGGCCGTTACGAACTGGAAGTCAGCGAATCCAGCGCCATGATTGCCCACGAGCTGCGTACGCC TCTGAATGCCGCCATGGGGCGCATACAAGGCATGATCGACGAGGTGTTCCCGCGTGACCTGGCACAACTGGAAATGGTCC ACCGCCAGCTCGGCCAGTTGAACAAACTGGTGAGTGATCTGCACCTGCTCTCGCTCGCCAGCGCGGGTCAGCTGACCCTG GACAAGACGGAGTTTTCCCTTGAGAAACTGGTGGTCGAACGGCTGGGCTGGTTTGCCGCACCGCTCGATGAGGCCGGTGT CGTCGTGACGATCGATATCCCGCGGAAATTGACCGTCAACGCCGACCGTGACCGGATCGGTCAGGTGGTGAATATTCTCG TCGATAATGCGCTGCGCTATTCGGCAATGGGCGGAGAACTGCTGATTGTCGGCAGAGCCAGCGCAGGGCGCATGGAACTG AGCGTTTTGGACCGCGGCCCCGGCTTTGACTCGGAGAACCTCGAACAGGTGTTCGACCGTTTCTGGCGTGCCGAACGTTC GCGGGCGCGCTATTCGGGAGGCAGCGGCCTTGGCCTGTCCATCGCCAGAGCCATTTGCCTCGAGCATGACGGCACTATCG AGGTCAGCAACAGACCAGGCGGAGGATCCGTCATCCGCTTGGAGATTCCGGGCTGA
Upstream 100 bases:
>100_bases ATGCGCATGTGCATAACCTGCGGCGCAAGCTGGAGATCCATGGCGTGGAAAACGTGCTGGTCACCGTCCGTTCGGTCGGC TATCGATTCAGGTAATCCTC
Downstream 100 bases:
>100_bases GCCTGTCTGCCCGGCCCCGCAGATCAGTGCCCCATCAACGAGTCGATACCGTCCGGCTTGTCATGCACACCAAACCGGTC CACCAGCGTGGCGGTGGCGC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRHFFRHRQKPLWHWVGMRMSMLAVGAVIVIAFCMWLHVTVSDWLTLQAMPADVRMEFLRLQAEPTLDMAKLRELFVEYY PIENLLPGIANKEWWVLAALVSIAIPIILFFGFLFSRPLSSQFSSIARGARQVAQGDFKTRLPMSTNGPDELQALVSDFN TMTTQLGRYELEVSESSAMIAHELRTPLNAAMGRIQGMIDEVFPRDLAQLEMVHRQLGQLNKLVSDLHLLSLASAGQLTL DKTEFSLEKLVVERLGWFAAPLDEAGVVVTIDIPRKLTVNADRDRIGQVVNILVDNALRYSAMGGELLIVGRASAGRMEL SVLDRGPGFDSENLEQVFDRFWRAERSRARYSGGSGLGLSIARAICLEHDGTIEVSNRPGGGSVIRLEIPG
Sequences:
>Translated_391_residues MRHFFRHRQKPLWHWVGMRMSMLAVGAVIVIAFCMWLHVTVSDWLTLQAMPADVRMEFLRLQAEPTLDMAKLRELFVEYY PIENLLPGIANKEWWVLAALVSIAIPIILFFGFLFSRPLSSQFSSIARGARQVAQGDFKTRLPMSTNGPDELQALVSDFN TMTTQLGRYELEVSESSAMIAHELRTPLNAAMGRIQGMIDEVFPRDLAQLEMVHRQLGQLNKLVSDLHLLSLASAGQLTL DKTEFSLEKLVVERLGWFAAPLDEAGVVVTIDIPRKLTVNADRDRIGQVVNILVDNALRYSAMGGELLIVGRASAGRMEL SVLDRGPGFDSENLEQVFDRFWRAERSRARYSGGSGLGLSIARAICLEHDGTIEVSNRPGGGSVIRLEIPG >Mature_391_residues MRHFFRHRQKPLWHWVGMRMSMLAVGAVIVIAFCMWLHVTVSDWLTLQAMPADVRMEFLRLQAEPTLDMAKLRELFVEYY PIENLLPGIANKEWWVLAALVSIAIPIILFFGFLFSRPLSSQFSSIARGARQVAQGDFKTRLPMSTNGPDELQALVSDFN TMTTQLGRYELEVSESSAMIAHELRTPLNAAMGRIQGMIDEVFPRDLAQLEMVHRQLGQLNKLVSDLHLLSLASAGQLTL DKTEFSLEKLVVERLGWFAAPLDEAGVVVTIDIPRKLTVNADRDRIGQVVNILVDNALRYSAMGGELLIVGRASAGRMEL SVLDRGPGFDSENLEQVFDRFWRAERSRARYSGGSGLGLSIARAICLEHDGTIEVSNRPGGGSVIRLEIPG
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=277, Percent_Identity=36.101083032491, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1786783, Length=288, Percent_Identity=29.1666666666667, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=28.1385281385281, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1789149, Length=339, Percent_Identity=24.4837758112094, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI1790346, Length=266, Percent_Identity=29.6992481203008, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=29.7297297297297, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI145693157, Length=217, Percent_Identity=29.0322580645161, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1788279, Length=346, Percent_Identity=24.8554913294798, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1787894, Length=292, Percent_Identity=27.3972602739726, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788549, Length=223, Percent_Identity=30.0448430493274, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789403, Length=293, Percent_Identity=27.6450511945392, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787374, Length=333, Percent_Identity=23.7237237237237, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790551, Length=293, Percent_Identity=28.3276450511945, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI48994928, Length=242, Percent_Identity=22.7272727272727, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788713, Length=225, Percent_Identity=21.7777777777778, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1789808, Length=292, Percent_Identity=23.6301369863014, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790861, Length=363, Percent_Identity=24.2424242424242, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 43674; Mature: 43674
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHFFRHRQKPLWHWVGMRMSMLAVGAVIVIAFCMWLHVTVSDWLTLQAMPADVRMEFLR CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHH LQAEPTLDMAKLRELFVEYYPIENLLPGIANKEWWVLAALVSIAIPIILFFGFLFSRPLS HCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH SQFSSIARGARQVAQGDFKTRLPMSTNGPDELQALVSDFNTMTTQLGRYELEVSESSAMI HHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH AHELRTPLNAAMGRIQGMIDEVFPRDLAQLEMVHRQLGQLNKLVSDLHLLSLASAGQLTL HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE DKTEFSLEKLVVERLGWFAAPLDEAGVVVTIDIPRKLTVNADRDRIGQVVNILVDNALRY CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHH SAMGGELLIVGRASAGRMELSVLDRGPGFDSENLEQVFDRFWRAERSRARYSGGSGLGLS HCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IARAICLEHDGTIEVSNRPGGGSVIRLEIPG HHHHHHHCCCCEEEECCCCCCCCEEEEECCC >Mature Secondary Structure MRHFFRHRQKPLWHWVGMRMSMLAVGAVIVIAFCMWLHVTVSDWLTLQAMPADVRMEFLR CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHH LQAEPTLDMAKLRELFVEYYPIENLLPGIANKEWWVLAALVSIAIPIILFFGFLFSRPLS HCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH SQFSSIARGARQVAQGDFKTRLPMSTNGPDELQALVSDFNTMTTQLGRYELEVSESSAMI HHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHH AHELRTPLNAAMGRIQGMIDEVFPRDLAQLEMVHRQLGQLNKLVSDLHLLSLASAGQLTL HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE DKTEFSLEKLVVERLGWFAAPLDEAGVVVTIDIPRKLTVNADRDRIGQVVNILVDNALRY CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHH SAMGGELLIVGRASAGRMELSVLDRGPGFDSENLEQVFDRFWRAERSRARYSGGSGLGLS HCCCCCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IARAICLEHDGTIEVSNRPGGGSVIRLEIPG HHHHHHHCCCCEEEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]