| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046297
Identifier: 66046297
GI number: 66046297
Start: 3666411
End: 3667268
Strand: Reverse
Name: 66046297
Synonym: Psyr_3066
Alternate gene names: NA
Gene position: 3667268-3666411 (Counterclockwise)
Preceding gene: 66046298
Following gene: 66046293
Centisome position: 60.18
GC content: 61.42
Gene sequence:
>858_bases ATGAGTCAGGTCGATGCGCTGAACTTCATTGATGTGCATTACCACGCCAATCCTGACGCGTTCATTCGTCGTCATGGTGC GATCGAGGCGGGCAGGTGCTACGCGCGGGCGCAGGGCAGGGTGGTGCTGAAGAATCATCTGGGGTGTACGGCAGCCCAGG CGTGGGAAGCGCGCGATCAGGGGTTTCCGGTCAGCGGCTCGGTGGTGCTGAACGAGATTGCCGGCGGCATCGACTACCGT GTGGTCGAGCGCAGCCTGTGTTTGCGTGGCGATGAGCCCGGGCGTTTCCTGGTTCACTTGCCAACCGTGACCGGCAGGAC GCATGCCAGTACGCTGACCCGCAACCTGAGCCATCCGCTGTTGCGGGACAAGCCCATCAAGCCTGCCAGAGTGACATCGG ACAACGGCCGGCTGACGCCACAGACGCTGGATATTCTGAGAATGGCGCGTGACTATCCGCTGGTGATCTCGACCGGGCAT GCCGATGCCAATGAAGTCAGGACGCTGATCGACGAAGCGCTGCGCATCGGTGTGCCAAGGTTGATGCTCAATCAGCCTGC CAATCCGTTGACCGGTCTTGACGCGGCCGAGCTGGCGCTGATCGGCACAGAGCCATCGGTCTACATCGAGCAGACCGCAC TGACGTACTTGCTGGGTTATCAGGACCGGCAGGATTTCAGCGATGTGTTGAGCCATGTCGGCAATGTGGTCTACAGCTCG GACCTGGGGCAGACCAGTCAGATCGATGTCCACCAGTGGCTGTCGCTGAGCGGGCAGTGGTTCGACGCGTTCGGCTTGAG CGACGAGCGCCGCACCGAGGTGACGCTGCTGAATCCGCAACGCATGTTGGCCCTTTAA
Upstream 100 bases:
>100_bases TGTGCATAGACGGCGGCGGGATGCGTCCGCTGGCGGATGACTTGCAGCAGGTGCTGGACAGCATCGACACCTTCTTGATG GTCCGCCAGGAGTGCGTGCA
Downstream 100 bases:
>100_bases GCTGTCCGGATAAGCGCCTCCCTGGCCAGCACCGCCAGGGAGGCCCGGCCATCAGGCTACTTCTGCGGACACCTTCGAAG TCATCGCCTCCACAACCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSQVDALNFIDVHYHANPDAFIRRHGAIEAGRCYARAQGRVVLKNHLGCTAAQAWEARDQGFPVSGSVVLNEIAGGIDYR VVERSLCLRGDEPGRFLVHLPTVTGRTHASTLTRNLSHPLLRDKPIKPARVTSDNGRLTPQTLDILRMARDYPLVISTGH ADANEVRTLIDEALRIGVPRLMLNQPANPLTGLDAAELALIGTEPSVYIEQTALTYLLGYQDRQDFSDVLSHVGNVVYSS DLGQTSQIDVHQWLSLSGQWFDAFGLSDERRTEVTLLNPQRMLAL
Sequences:
>Translated_285_residues MSQVDALNFIDVHYHANPDAFIRRHGAIEAGRCYARAQGRVVLKNHLGCTAAQAWEARDQGFPVSGSVVLNEIAGGIDYR VVERSLCLRGDEPGRFLVHLPTVTGRTHASTLTRNLSHPLLRDKPIKPARVTSDNGRLTPQTLDILRMARDYPLVISTGH ADANEVRTLIDEALRIGVPRLMLNQPANPLTGLDAAELALIGTEPSVYIEQTALTYLLGYQDRQDFSDVLSHVGNVVYSS DLGQTSQIDVHQWLSLSGQWFDAFGLSDERRTEVTLLNPQRMLAL >Mature_284_residues SQVDALNFIDVHYHANPDAFIRRHGAIEAGRCYARAQGRVVLKNHLGCTAAQAWEARDQGFPVSGSVVLNEIAGGIDYRV VERSLCLRGDEPGRFLVHLPTVTGRTHASTLTRNLSHPLLRDKPIKPARVTSDNGRLTPQTLDILRMARDYPLVISTGHA DANEVRTLIDEALRIGVPRLMLNQPANPLTGLDAAELALIGTEPSVYIEQTALTYLLGYQDRQDFSDVLSHVGNVVYSSD LGQTSQIDVHQWLSLSGQWFDAFGLSDERRTEVTLLNPQRMLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31512; Mature: 31381
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVDALNFIDVHYHANPDAFIRRHGAIEAGRCYARAQGRVVLKNHLGCTAAQAWEARDQ CCCCCCEEEEEEEEECCCHHHHHHCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHHHCC GFPVSGSVVLNEIAGGIDYRVVERSLCLRGDEPGRFLVHLPTVTGRTHASTLTRNLSHPL CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCC LRDKPIKPARVTSDNGRLTPQTLDILRMARDYPLVISTGHADANEVRTLIDEALRIGVPR CCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCH LMLNQPANPLTGLDAAELALIGTEPSVYIEQTALTYLLGYQDRQDFSDVLSHVGNVVYSS HHHCCCCCCCCCCCHHHEEEECCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEC DLGQTSQIDVHQWLSLSGQWFDAFGLSDERRTEVTLLNPQRMLAL CCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCEEEEECHHHHHCC >Mature Secondary Structure SQVDALNFIDVHYHANPDAFIRRHGAIEAGRCYARAQGRVVLKNHLGCTAAQAWEARDQ CCCCCEEEEEEEEECCCHHHHHHCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHHHCC GFPVSGSVVLNEIAGGIDYRVVERSLCLRGDEPGRFLVHLPTVTGRTHASTLTRNLSHPL CCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCC LRDKPIKPARVTSDNGRLTPQTLDILRMARDYPLVISTGHADANEVRTLIDEALRIGVPR CCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCH LMLNQPANPLTGLDAAELALIGTEPSVYIEQTALTYLLGYQDRQDFSDVLSHVGNVVYSS HHHCCCCCCCCCCCHHHEEEECCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEC DLGQTSQIDVHQWLSLSGQWFDAFGLSDERRTEVTLLNPQRMLAL CCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCEEEEECHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA