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The map label for this gene is 66046260

Identifier: 66046260

GI number: 66046260

Start: 3627052

End: 3628674

Strand: Direct

Name: 66046260

Synonym: Psyr_3029

Alternate gene names: NA

Gene position: 3627052-3628674 (Clockwise)

Preceding gene: 66046258

Following gene: 66046263

Centisome position: 59.52

GC content: 61.24

Gene sequence:

>1623_bases
ATGCGCAAGGACCTGCAAGTGCCCTTCATGCTGGCGATCACCGACTGCCAGCCGGATCTGCATATCATCAACTTCGCCGG
CCATGAAGCCCTCAACGAAACGTATCGCTTCGACCTCTGGATGATCGGCAGCCACCCGCAGCTGGATGTGCGCAGCCTGC
TGCATCGCGAAGCGTTTTTAAGCTTCGGCGAATCTGGCGGCGGCAGGCATGGCCGTATCGAGCATGCGGCCCGGCTGCAC
AGGGGGAATCGCGTGAGCCTTTACCATCTGATTCTGGTGCCTGATCTGCAGCGGCTGGCGCAACATCGACAACGCCGCGC
CTATCAGGACCGTGCGATTCCTCAACTGATCGTGCGCTTGCTTGAAGCACACGGTATCGGAACGAACGCTTACCGCTTCG
AGCACGTGAACGGTCTTTATCCTGCCAGGCCGCTACATATCCAGTACGACGAAAGCGATCTGCACCTGTTGCAGCGCCTG
TGCGAGGAAGAAGGCATGCATTTCCGCTTCGAGCATCGCCGGAGCGGCCACCGGCTGGTGTTCTCGGACGACCCTGCCAG
CTTTCCGGCGCAGCCATTGCCGGTGCGTTTCAAGCGCCCGCAAGCGTCAGACGTACCTAGAGAGACGCTGTTACACCTCG
CCGAGCGACTGGGGTTTCCGCAGTTTTCAAGACAACCCGCCGACCACCCGCAACCTGCGCACGCACCTTCTTCGCCGCAC
GATGCACACCCTCTGACGATAGCGGCCAATCATGCCTTTCAACCGCCAGGCTTACGTGGAGCGATCAGTCCCCGGGAGGC
ACTGAGTCGGCAGCGTGGCAGTCGCGGACTGGAGCGCCTGCGTTGCGAACGGAGTGATGTCAGAGGACAAAGCATCGACA
CCGCCTTGCAGTGTGGTGAAGTCATTCAGGTGCTCGATCACCCGGAGCCATTGCTTAATGATCAGTGGTTGCTGACCGAA
GTCGTTCACGCAGGCAGGCAGTTACAGGTGCTGAAGGGCGCCGCCGCCCATGATGCGCTGGCAATCCTGCGCATCCTCGT
CGAAGCGCAACGTTCGTCACCCGAGGCTGAACAACTGCAAGGCAACGGTTACTGCAACAACTTCAGGGTAATACCCTGGG
CGACGCCGTTTCGCCCGTCGATCAGCCACCCTCGACCCATTGTCACCGGTGAGCATTTCGCCACCTTGCAGCGCAACGAC
AACCAACCGGACCCACCCGGATATCGTTCAATCCGCTTCGACTGGCACGCTCAAGGCCCGGAAGACGAACCCGCACAACG
TTGGCCGGTGGCAAGAGTCGCCTGCCCGGAGATTCATCGGCTACCGGCGGGTACACGTGTGCGGGTCCGCTACCTCGACA
ATCATCCCGAACGCCCCGTGATCTGCGCGGCACTGTTAGCGAATCCGGGGCAGGACGCAGTGACTGCTTACCCCGCCGAC
TGCGTTCGACTGGCGAACGGTCAGCGCCTGCACATCAACGCGCATGACGGATTGACAGTGCGCGGGCGGACCGCCGAGTT
GCGGGTCGACGCGCAACGCATTCTGATCGTTGCCCATGCAGATCAGCAGTCCTTGAAATCGGGCTGGCGCTTGTCGATGA
AGGCGCGCATGCCCTCCTTCTGA

Upstream 100 bases:

>100_bases
CGCTTGTAGGCTCTTTCCGAAAAACCTTGCAGCAATGCTTTTGCGCCTCCGTATTCCGTAACCTGCGCGGCCCCGTTTTT
GAAGCTAGAGAGCCCCGCAG

Downstream 100 bases:

>100_bases
TCCTGGCTGGCGAAGGCGGCGTGAAAAACCCGGCGCTCGAAGCGGATGCCTTCGGCCAGGCTGACCTCGAACGCGCGGTT
GACGCTCTCTTTGACCATCA

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VrgG Protein; VgrG Protein; Rhs Accessory Genetic Element

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MRKDLQVPFMLAITDCQPDLHIINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFLSFGESGGGRHGRIEHAARLH
RGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRLLEAHGIGTNAYRFEHVNGLYPARPLHIQYDESDLHLLQRL
CEEEGMHFRFEHRRSGHRLVFSDDPASFPAQPLPVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPH
DAHPLTIAANHAFQPPGLRGAISPREALSRQRGSRGLERLRCERSDVRGQSIDTALQCGEVIQVLDHPEPLLNDQWLLTE
VVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQLQGNGYCNNFRVIPWATPFRPSISHPRPIVTGEHFATLQRND
NQPDPPGYRSIRFDWHAQGPEDEPAQRWPVARVACPEIHRLPAGTRVRVRYLDNHPERPVICAALLANPGQDAVTAYPAD
CVRLANGQRLHINAHDGLTVRGRTAELRVDAQRILIVAHADQQSLKSGWRLSMKARMPSF

Sequences:

>Translated_540_residues
MRKDLQVPFMLAITDCQPDLHIINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFLSFGESGGGRHGRIEHAARLH
RGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRLLEAHGIGTNAYRFEHVNGLYPARPLHIQYDESDLHLLQRL
CEEEGMHFRFEHRRSGHRLVFSDDPASFPAQPLPVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPH
DAHPLTIAANHAFQPPGLRGAISPREALSRQRGSRGLERLRCERSDVRGQSIDTALQCGEVIQVLDHPEPLLNDQWLLTE
VVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQLQGNGYCNNFRVIPWATPFRPSISHPRPIVTGEHFATLQRND
NQPDPPGYRSIRFDWHAQGPEDEPAQRWPVARVACPEIHRLPAGTRVRVRYLDNHPERPVICAALLANPGQDAVTAYPAD
CVRLANGQRLHINAHDGLTVRGRTAELRVDAQRILIVAHADQQSLKSGWRLSMKARMPSF
>Mature_540_residues
MRKDLQVPFMLAITDCQPDLHIINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFLSFGESGGGRHGRIEHAARLH
RGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRLLEAHGIGTNAYRFEHVNGLYPARPLHIQYDESDLHLLQRL
CEEEGMHFRFEHRRSGHRLVFSDDPASFPAQPLPVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPH
DAHPLTIAANHAFQPPGLRGAISPREALSRQRGSRGLERLRCERSDVRGQSIDTALQCGEVIQVLDHPEPLLNDQWLLTE
VVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQLQGNGYCNNFRVIPWATPFRPSISHPRPIVTGEHFATLQRND
NQPDPPGYRSIRFDWHAQGPEDEPAQRWPVARVACPEIHRLPAGTRVRVRYLDNHPERPVICAALLANPGQDAVTAYPAD
CVRLANGQRLHINAHDGLTVRGRTAELRVDAQRILIVAHADQQSLKSGWRLSMKARMPSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61148; Mature: 61148

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDLQVPFMLAITDCQPDLHIINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFL
CCCCCCCCEEEEEECCCCCEEEEEECCHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH
SFGESGGGRHGRIEHAARLHRGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRL
HCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEAHGIGTNAYRFEHVNGLYPARPLHIQYDESDLHLLQRLCEEEGMHFRFEHRRSGHRLV
HHHCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCEEE
FSDDPASFPAQPLPVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPH
ECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DAHPLTIAANHAFQPPGLRGAISPREALSRQRGSRGLERLRCERSDVRGQSIDTALQCGE
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VIQVLDHPEPLLNDQWLLTEVVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQLQ
HHHHHCCCCCCCCCCHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHHHHHHCCCCHHHHC
GNGYCNNFRVIPWATPFRPSISHPRPIVTGEHFATLQRNDNQPDPPGYRSIRFDWHAQGP
CCCCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
EDEPAQRWPVARVACPEIHRLPAGTRVRVRYLDNHPERPVICAALLANPGQDAVTAYPAD
CCCCHHHCCCHHHCCCHHHHCCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCEEECCHH
CVRLANGQRLHINAHDGLTVRGRTAELRVDAQRILIVAHADQQSLKSGWRLSMKARMPSF
HHHHCCCCEEEEECCCCEEEECCCEEEEECCEEEEEEEECCHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MRKDLQVPFMLAITDCQPDLHIINFAGHEALNETYRFDLWMIGSHPQLDVRSLLHREAFL
CCCCCCCCEEEEEECCCCCEEEEEECCHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHH
SFGESGGGRHGRIEHAARLHRGNRVSLYHLILVPDLQRLAQHRQRRAYQDRAIPQLIVRL
HCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEAHGIGTNAYRFEHVNGLYPARPLHIQYDESDLHLLQRLCEEEGMHFRFEHRRSGHRLV
HHHCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCEEE
FSDDPASFPAQPLPVRFKRPQASDVPRETLLHLAERLGFPQFSRQPADHPQPAHAPSSPH
ECCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DAHPLTIAANHAFQPPGLRGAISPREALSRQRGSRGLERLRCERSDVRGQSIDTALQCGE
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VIQVLDHPEPLLNDQWLLTEVVHAGRQLQVLKGAAAHDALAILRILVEAQRSSPEAEQLQ
HHHHHCCCCCCCCCCHHHHHHHHCCCEEEEHHCCHHHHHHHHHHHHHHHHHCCCCHHHHC
GNGYCNNFRVIPWATPFRPSISHPRPIVTGEHFATLQRNDNQPDPPGYRSIRFDWHAQGP
CCCCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEEEECCCCC
EDEPAQRWPVARVACPEIHRLPAGTRVRVRYLDNHPERPVICAALLANPGQDAVTAYPAD
CCCCHHHCCCHHHCCCHHHHCCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCEEECCHH
CVRLANGQRLHINAHDGLTVRGRTAELRVDAQRILIVAHADQQSLKSGWRLSMKARMPSF
HHHHCCCCEEEEECCCCEEEECCCEEEEECCEEEEEEEECCHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA