| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pnuC [H]
Identifier: 66046240
GI number: 66046240
Start: 3603690
End: 3604253
Strand: Direct
Name: pnuC [H]
Synonym: Psyr_3009
Alternate gene names: 66046240
Gene position: 3603690-3604253 (Clockwise)
Preceding gene: 66046237
Following gene: 66046241
Centisome position: 59.14
GC content: 60.11
Gene sequence:
>564_bases ATGTCCGGGCTTGAACTCTTCGCTGCCGCCATCGGCGTTATCGCAGTCTGGCTGACAGTGAAGCAGAATCCCTGGTGCTG GCCAATCGGCCTGGTCATGGTGGTGATTTACATCTGGATATTCTTCGACGTGAAGCTGTATTCGGACATGCTTCTGCAGG TCATCTACGCAGGCCTGCAGGTCTATGGCTGGCTGCAATGGACCCGGCACGGTGACGGCCTGCCGGTCAAAGCCGTAACC ACGTTGCAGAACAGTTCGGTGCTCAAGGGGCTGGCGGTCGGCGCACTCATCAGCGTTGCACTGGGTGCCGGCATGGCGCA TTTCACCGATGCTGCACAACCCTGGCTGGACGCCGCGTTGACCGGGTTCAGTCTGGTGGCGCAGGTCTGGATGGCGCAAA AACGCGTTCAGTGCTGGCCGCTGTGGATCCTGCTCGATGTGATTTTCGTCGGCCTGTTCATCTACAAGGAGCTGTACCTG ACGGCTGCGCTGTATGGCTTGTTCACCCTGCTGGCGGTACAGGGCTGGCGCGAGTGGCGTAACGATCTGGCGCTGGCGCG ATGA
Upstream 100 bases:
>100_bases CTGCTGACGTAAGCTCTGGCGCAACACAAGCTGCACGCCGCGCGCAGAAGCGCATACAATCGCCGGCCCCACCCCTCACT ACCCTCACCAAGGAGCCGCC
Downstream 100 bases:
>100_bases AAGTTCTGGTCCTCACCGGCCCCGAGTCCAGCGGCAAGAGCTGGCTGTCGGCGCAAATACAGCATAGGTTTGGCGGCCTG CTGGTCGGCGAATACGTCCG
Product: nicotinamide mononucleotide transporter
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSGLELFAAAIGVIAVWLTVKQNPWCWPIGLVMVVIYIWIFFDVKLYSDMLLQVIYAGLQVYGWLQWTRHGDGLPVKAVT TLQNSSVLKGLAVGALISVALGAGMAHFTDAAQPWLDAALTGFSLVAQVWMAQKRVQCWPLWILLDVIFVGLFIYKELYL TAALYGLFTLLAVQGWREWRNDLALAR
Sequences:
>Translated_187_residues MSGLELFAAAIGVIAVWLTVKQNPWCWPIGLVMVVIYIWIFFDVKLYSDMLLQVIYAGLQVYGWLQWTRHGDGLPVKAVT TLQNSSVLKGLAVGALISVALGAGMAHFTDAAQPWLDAALTGFSLVAQVWMAQKRVQCWPLWILLDVIFVGLFIYKELYL TAALYGLFTLLAVQGWREWRNDLALAR >Mature_186_residues SGLELFAAAIGVIAVWLTVKQNPWCWPIGLVMVVIYIWIFFDVKLYSDMLLQVIYAGLQVYGWLQWTRHGDGLPVKAVTT LQNSSVLKGLAVGALISVALGAGMAHFTDAAQPWLDAALTGFSLVAQVWMAQKRVQCWPLWILLDVIFVGLFIYKELYLT AALYGLFTLLAVQGWREWRNDLALAR
Specific function: Required for nicotinamide riboside transport across the inner membrane [H]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786965, Length=207, Percent_Identity=28.5024154589372, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006419 [H]
Pfam domain/function: PF04973 NMN_transporter [H]
EC number: NA
Molecular weight: Translated: 20934; Mature: 20803
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLELFAAAIGVIAVWLTVKQNPWCWPIGLVMVVIYIWIFFDVKLYSDMLLQVIYAGLQ CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYGWLQWTRHGDGLPVKAVTTLQNSSVLKGLAVGALISVALGAGMAHFTDAAQPWLDAAL HHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TGFSLVAQVWMAQKRVQCWPLWILLDVIFVGLFIYKELYLTAALYGLFTLLAVQGWREWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLALAR HHHCCCC >Mature Secondary Structure SGLELFAAAIGVIAVWLTVKQNPWCWPIGLVMVVIYIWIFFDVKLYSDMLLQVIYAGLQ CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYGWLQWTRHGDGLPVKAVTTLQNSSVLKGLAVGALISVALGAGMAHFTDAAQPWLDAAL HHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TGFSLVAQVWMAQKRVQCWPLWILLDVIFVGLFIYKELYLTAALYGLFTLLAVQGWREWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLALAR HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2198247; 11677609 [H]