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The map label for this gene is ybdF [C]

Identifier: 66046237

GI number: 66046237

Start: 3601814

End: 3602182

Strand: Direct

Name: ybdF [C]

Synonym: Psyr_3006

Alternate gene names: 66046237

Gene position: 3601814-3602182 (Clockwise)

Preceding gene: 66046232

Following gene: 66046240

Centisome position: 59.11

GC content: 60.16

Gene sequence:

>369_bases
ATGCCAAAGAGCCCGCAAAAGAGCCTGCACAAGGAGGACATCGCCAGATTCTGCCTCGATCTGCCGGGTGCGCGTGAAGA
CTACAAGTGGGGCGGCGTGCGGGTTTTTTCCGTCGCCGAAAAGAAAATGTTCGCGGTCATGGGTCTGACCGGCGAGGACC
TTGCGTTCAAGGTCCACCCGGAATTGTTTCTGGGTTACGTGGATCGACCCGGCATACGACCTGCGCCCTACCTGGCGCGT
GCGCACTGGATCAGCGTGGCAAACGTACAGACGCTGAGCGCCGATGAGTTGCGCGATCTGCTGACCCGCTCGCACCAGTT
GGTGGTCGGCAGGCTGCCGAAACGGCAACAGATCGGCCTGAAGCTATAA

Upstream 100 bases:

>100_bases
GCACACTAATGAGTGTCGCAGCAGCATACAATCGGCTGATCGAATATCCGTGCGGCTATCGAACAGCTTACCGTGCGCCG
TCAAAACCCAGGGAGCATCC

Downstream 100 bases:

>100_bases
CGGCAACAGCTGCACAAGCCGCTTGCCCAGAAACAGCCAGTCAATCCACAGCGCCTGATGCAGCAGCACGATCAGCCAGA
ATACGACCTGAAAAGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPKSPQKSLHKEDIARFCLDLPGAREDYKWGGVRVFSVAEKKMFAVMGLTGEDLAFKVHPELFLGYVDRPGIRPAPYLAR
AHWISVANVQTLSADELRDLLTRSHQLVVGRLPKRQQIGLKL

Sequences:

>Translated_122_residues
MPKSPQKSLHKEDIARFCLDLPGAREDYKWGGVRVFSVAEKKMFAVMGLTGEDLAFKVHPELFLGYVDRPGIRPAPYLAR
AHWISVANVQTLSADELRDLLTRSHQLVVGRLPKRQQIGLKL
>Mature_121_residues
PKSPQKSLHKEDIARFCLDLPGAREDYKWGGVRVFSVAEKKMFAVMGLTGEDLAFKVHPELFLGYVDRPGIRPAPYLARA
HWISVANVQTLSADELRDLLTRSHQLVVGRLPKRQQIGLKL

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13793; Mature: 13662

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSPQKSLHKEDIARFCLDLPGAREDYKWGGVRVFSVAEKKMFAVMGLTGEDLAFKVHP
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHEECCCCCCCEEEECH
ELFLGYVDRPGIRPAPYLARAHWISVANVQTLSADELRDLLTRSHQLVVGRLPKRQQIGL
HHEEEECCCCCCCCCCHHHHHHEEEECCEEECCHHHHHHHHHHCCCEEECCCCCCCCCCC
KL
CC
>Mature Secondary Structure 
PKSPQKSLHKEDIARFCLDLPGAREDYKWGGVRVFSVAEKKMFAVMGLTGEDLAFKVHP
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHEECCCCCCCEEEECH
ELFLGYVDRPGIRPAPYLARAHWISVANVQTLSADELRDLLTRSHQLVVGRLPKRQQIGL
HHEEEECCCCCCCCCCHHHHHHEEEECCEEECCHHHHHHHHHHCCCEEECCCCCCCCCCC
KL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA