| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046186
Identifier: 66046186
GI number: 66046186
Start: 3543012
End: 3543413
Strand: Direct
Name: 66046186
Synonym: Psyr_2955
Alternate gene names: NA
Gene position: 3543012-3543413 (Clockwise)
Preceding gene: 66046185
Following gene: 66046187
Centisome position: 58.14
GC content: 55.97
Gene sequence:
>402_bases ATGATCGATTCACGCACCGCGCCTTACGCTGCTTTTGTACTGCGCCTGGCATTGGGCCTCATGTTCATCGCCCACGGCCT GACCAAAGTATTGGTCTTTACTCCGGCAGGTACTGCTGGCTTTTTCGAATCCATTGGCTTTCCAGGCTTCCTTGCCTATC CGGTTATGGCCTTCGAAGTGATCGGCGGTTTGATGCTGGTACTGGGGGTCTACGCCCGCTGGGTTGCTGCAATCGCTGTT GTTCAACTGTTTGTCGCCGCCACCGTGCATTTCGGCAACGGCTGGAGCTTCACCAACGCTAACGGTGGCTGGGAATATCC GATCTATCTGTCCGTCACAGCGCTGGTCCTCGCTCTGCTGGGTGATGGCGCGTTTGCTGTGAAATCTTCCAGAACGCAGT GA
Upstream 100 bases:
>100_bases GATCATTCCGCAGGAACTGGCTGACTTCTCGCAATGGCTGGACCGGACACTTTCGCTTTCCAACTGAACCCCACTGCTTA TTTAACACAAGGAATTTTCC
Downstream 100 bases:
>100_bases CAGGCACCTATCGATGCTCGGCCCAAAGACAACGATCAAAGGCTCGAGCATCATCAATTGGAGAAAATCACATGAAGTCT CGTGCTGCAGTTGCATTTGA
Product: Surfeit locus 4-related
Products: NA
Alternate protein names: DoxD-Like Family Protein; DoxX Family; Transmembrane Protein; Oxidoreductase CatD; DoxD-Like Protein; Surfeit Locus 4-Related
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIDSRTAPYAAFVLRLALGLMFIAHGLTKVLVFTPAGTAGFFESIGFPGFLAYPVMAFEVIGGLMLVLGVYARWVAAIAV VQLFVAATVHFGNGWSFTNANGGWEYPIYLSVTALVLALLGDGAFAVKSSRTQ
Sequences:
>Translated_133_residues MIDSRTAPYAAFVLRLALGLMFIAHGLTKVLVFTPAGTAGFFESIGFPGFLAYPVMAFEVIGGLMLVLGVYARWVAAIAV VQLFVAATVHFGNGWSFTNANGGWEYPIYLSVTALVLALLGDGAFAVKSSRTQ >Mature_133_residues MIDSRTAPYAAFVLRLALGLMFIAHGLTKVLVFTPAGTAGFFESIGFPGFLAYPVMAFEVIGGLMLVLGVYARWVAAIAV VQLFVAATVHFGNGWSFTNANGGWEYPIYLSVTALVLALLGDGAFAVKSSRTQ
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14126; Mature: 14126
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSRTAPYAAFVLRLALGLMFIAHGLTKVLVFTPAGTAGFFESIGFPGFLAYPVMAFEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCHHHHHHHHHHHH IGGLMLVLGVYARWVAAIAVVQLFVAATVHFGNGWSFTNANGGWEYPIYLSVTALVLALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH GDGAFAVKSSRTQ CCCCCCCCCCCCC >Mature Secondary Structure MIDSRTAPYAAFVLRLALGLMFIAHGLTKVLVFTPAGTAGFFESIGFPGFLAYPVMAFEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCHHHHHHHHHHHH IGGLMLVLGVYARWVAAIAVVQLFVAATVHFGNGWSFTNANGGWEYPIYLSVTALVLALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHH GDGAFAVKSSRTQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA