Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is hipA [C]

Identifier: 66046155

GI number: 66046155

Start: 3512951

End: 3514246

Strand: Reverse

Name: hipA [C]

Synonym: Psyr_2924

Alternate gene names: 66046155

Gene position: 3514246-3512951 (Counterclockwise)

Preceding gene: 66046156

Following gene: 66046146

Centisome position: 57.67

GC content: 58.49

Gene sequence:

>1296_bases
ATGCTTGAGCAGGTTAACGTCTTCTACGAGGGCTGGGGTGAGCGATGGCAGTGGGGCACGCTGGTCTCGACGACCGCTTT
GACCGGTCGCCCGCTGATCGTGTTCGAATACAGCAATGAAGCCAGACAAACGGGCCTGGAACTGTCCTCCTATACGCTGC
CCCTGGAGGGGGACAGGTTGCGTCGAGACTTCCCGGACCATCAGCTGTACTTGCCAGGGCCTGTTTACGACTCGTTGCCG
GATGGATGGGGCATGTTGTTGATGGACCGTCTTTTCAGGCGCCGCGGGCTCACCACCGCGCGCATCGGCCCTCTGGAGCG
GCTGGCCTATATCGGTAGCAGTGCAATGGGCGCCATGTCGTTTGAGCCCGTGGCGCCCGAAGGGCAGGAATCTGACGTCC
ACATCCCGCTGGAACAGCTCGCCGCCGACGTGAAGCAAGTACTGCATGGAAACGGTGGTGAGTTCCTGCAGGCATTGCTG
CTGGTGGGTGGCTCGCCTCAAGGTGCAAGGCCCAAGGCTCTCGTCTATCGCGATCCTGAAACTGGCGGGTTTACCACTGC
TGCTACGCCGGGCTTCGAAGCATGGTTGATCAAGTTTCCGGCCAAAGAAGAACATGCAGAAGTGTGCGCCATCGAAATGG
TCTACGCCGAGTGCCTGCGCATGTGCGGTATCGAGACCCCTGACACCCAGTACTTAAATCTGCCTGATGGCCTGGCAGCG
TTTGCCAGTAAGCGATTTGACCGCCGCGGTGGTCTACGTATACCCATGCAAAGCCTGGCCGCCTTTACGGGGGCAAATTA
CCAGTCTCCGGGTGTGTTGGACTACGTCAACTTTTTGCGGGCAACACAGATGTGTACCAACGATGTACGAGAGATGGCAC
GCGCGTTCGAACGTGCCGTTTTTAACGTTGCGTTCAACAACCGAGACGATCATCCCAAGAATTTCGCCTACATCATGTCG
CAGGACGGTCAGTGGCGACTGTCGCCGGCTTACGACGTAACCTTCTGCGAGGGGCCAAGCGGATACCATCAGATGGACGT
GATGGGAGAGGCGCTGGAGATTTCCCGTGCGCAAATGCTTCGGCTTGCCGAGGAAGCCGAGATGTCCCCGGACGCTGCAA
CCGGAGTGATTGACGGCATGTGTGATGTAGCGAGCCGGTTTACAGCCATCGCCGAGAACCTGTGCCCGCAGGTTATTACT
CTAGACACCCTGCGCATGATCCAAAGCCGCATTGATCAGAACGTAGCCCGGTTACACCACAGTCAGGCCGACGGCGGTCA
CGGGCGATTCTCATAA

Upstream 100 bases:

>100_bases
GAACTCGAAGGCCTGTTTCTGCCAAAGCTGGACAGCATCGAAGACATTCGACGCTACGAAAACAGCGCCAATCGTCTCCG
TACAAAGAGGAAGTCCGGCG

Downstream 100 bases:

>100_bases
ACGATGCTGCCGTATGCTTCGAGCGCTCAGGGCCGTGTGCAAGACTTTGAGCATCCGCAAAGTTGCCCTGTCATTACCTT
CATCACGGTGTAGCGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Hipa Domain Protein; HipA-Like C-Terminal Domain Family; HipA-Like Protein; Protein With HipA-Like Domain; HipA-Family Phosphatidylinositol 3/4-Kinase; Hipa Protein; Protein Containing HipA-Like C-Terminal Domain; Transcriptional Regulator; Amidophosphoribosyl Transferase; HipA-Like N-Terminal Domain Family; HIPA Protein; HipA Family Protein; Conserved Protein; Capsule Biosynthesis Protein HipA; Capsule Biosynthesis -Like Protein; Orf_Bo

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRLRRDFPDHQLYLPGPVYDSLP
DGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMSFEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALL
LVGGSPQGARPKALVYRDPETGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA
FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAVFNVAFNNRDDHPKNFAYIMS
QDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQMLRLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVIT
LDTLRMIQSRIDQNVARLHHSQADGGHGRFS

Sequences:

>Translated_431_residues
MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRLRRDFPDHQLYLPGPVYDSLP
DGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMSFEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALL
LVGGSPQGARPKALVYRDPETGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA
FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAVFNVAFNNRDDHPKNFAYIMS
QDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQMLRLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVIT
LDTLRMIQSRIDQNVARLHHSQADGGHGRFS
>Mature_431_residues
MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRLRRDFPDHQLYLPGPVYDSLP
DGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMSFEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALL
LVGGSPQGARPKALVYRDPETGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA
FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAVFNVAFNNRDDHPKNFAYIMS
QDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQMLRLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVIT
LDTLRMIQSRIDQNVARLHHSQADGGHGRFS

Specific function: Unbalanced Or Excessive Expression Of Hipa Is Toxic To The Cell. [C]

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47880; Mature: 47880

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRL
CCCCEEEHHHCCCCCCCCCCEEEEHEECCCCEEEEEECCHHHHCCCCHHHEECCCCCCHH
RRDFPDHQLYLPGPVYDSLPDGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMS
HCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCCCCCCCC
FEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALLLVGGSPQGARPKALVYRDPE
CCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC
TGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHH
FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAV
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNVAFNNRDDHPKNFAYIMSQDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQML
HHEEECCCCCCCCCEEEEECCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
RLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVITLDTLRMIQSRIDQNVARLHH
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SQADGGHGRFS
CCCCCCCCCCC
>Mature Secondary Structure
MLEQVNVFYEGWGERWQWGTLVSTTALTGRPLIVFEYSNEARQTGLELSSYTLPLEGDRL
CCCCEEEHHHCCCCCCCCCCEEEEHEECCCCEEEEEECCHHHHCCCCHHHEECCCCCCHH
RRDFPDHQLYLPGPVYDSLPDGWGMLLMDRLFRRRGLTTARIGPLERLAYIGSSAMGAMS
HCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCHHHHHHHHCCCCCCCCC
FEPVAPEGQESDVHIPLEQLAADVKQVLHGNGGEFLQALLLVGGSPQGARPKALVYRDPE
CCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC
TGGFTTAATPGFEAWLIKFPAKEEHAEVCAIEMVYAECLRMCGIETPDTQYLNLPDGLAA
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHH
FASKRFDRRGGLRIPMQSLAAFTGANYQSPGVLDYVNFLRATQMCTNDVREMARAFERAV
HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNVAFNNRDDHPKNFAYIMSQDGQWRLSPAYDVTFCEGPSGYHQMDVMGEALEISRAQML
HHEEECCCCCCCCCEEEEECCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
RLAEEAEMSPDAATGVIDGMCDVASRFTAIAENLCPQVITLDTLRMIQSRIDQNVARLHH
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SQADGGHGRFS
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA