Click here to switch to the map view.

The map label for this gene is yejE [H]

Identifier: 66046135

GI number: 66046135

Start: 3483174

End: 3484199

Strand: Direct

Name: yejE [H]

Synonym: Psyr_2904

Alternate gene names: 66046135

Gene position: 3483174-3484199 (Clockwise)

Preceding gene: 66046134

Following gene: 66046136

Centisome position: 57.16

GC content: 62.57

Gene sequence:

>1026_bases
ATGATGCGCAGCCTTTCGCCGCTGGCCCGTCGTCGCCTGGAACGTTTTCGCAGCAATCGCCGCGGCTGGTGGTCGCTGTG
GCTGTTCTGCGGGCTGTTTGCCCTGACCCTGGGTGGCGAACTGATCGCCAATGACAAGCCGCTGCTGGTCAGCTATCAGC
ACTCGCTGTATTTCCCGGTGTTCAAGCGTTATACCGAGCAGCAATTCGGCGGCGAGCTGCCCTTCCAGCCCGATTACCGC
AGCGACTACGTGCGTACGCTGATCAGCAAAGGTGACGGCTGGATGCTGTTCCCGCCTATTCCGTTCAGTGACGACACGCC
CAACTATGACCTGACCACCCCTGCCCCCAGCCCGCCCTCTGCAGAAAACTGGCTCGGCACCGATGATCAGGCGCGCGACG
TCATGGCGCGGGTGATCTTCGGCGCCCGGGTATCGATTCTGTTTGCTCTGGCGCTGACCTTTATCAGCGCATTGATCGGC
ATCAGCGCCGGGGCGTTGCAGGGTTATTACGGCGGCTGGGTCGACCTGTTCGGTCAGCGACTGCTGGAGGTCTGGTCAGG
CCTGCCGGTGCTGTACCTGCTGATCATCCTCTCAGGCTTCGTCGAACCCGATTTCTGGTGGCTGCTGGGCATCATGGCGC
TGTTTTCCTGGCTGACCCTGGTCGATGTGGTGCGCGCCGAGTTTCTGCGCGGCCGTAACCTCGAATACGTCAAGGCCGCC
CGCGCGCTCGGTCTGGGCGACCGAAAAGTGATCATGCGCCACATCCTGCCCAACGCAATGACTGCGACGTTGAGCTATCT
GCCGTTCATCCTTACCGGCGCCATCTCGACCCTCACCGCGCTGGACTTTCTGGGCTTCGGCATGCCTGCCGGCAGCGCGT
CGCTGGGCGAACTGATCGCCCAGGGCAAGCAGAACCTGCAAGCGCCCTGGCTGGGACTGACGGCGTTCTTTGCCCTCGCG
TTGATCCTGACGCTGCTGGTATTCATAGGCGAGGCGCTGCGTGATGCCTTCGACCCGAGGTCCTGA

Upstream 100 bases:

>100_bases
CGTTGTTCATCTTCACCGTGTTCGGCCTGCTGATAAAACTGATCGGCGATATCTGCTACACGCTGGTCGACCCCAGAATC
GACTTCAGCGCGAGGAATGC

Downstream 100 bases:

>100_bases
CATGTCGGAAAACCTGATCGAAATCCGCGACCTGAGCGTCGCCTTCAACGGGCAAAAAGTGGTCAGCAACCTGAGCCTGG
ATGTGCGCCGCGGCGAGTGC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MMRSLSPLARRRLERFRSNRRGWWSLWLFCGLFALTLGGELIANDKPLLVSYQHSLYFPVFKRYTEQQFGGELPFQPDYR
SDYVRTLISKGDGWMLFPPIPFSDDTPNYDLTTPAPSPPSAENWLGTDDQARDVMARVIFGARVSILFALALTFISALIG
ISAGALQGYYGGWVDLFGQRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAA
RALGLGDRKVIMRHILPNAMTATLSYLPFILTGAISTLTALDFLGFGMPAGSASLGELIAQGKQNLQAPWLGLTAFFALA
LILTLLVFIGEALRDAFDPRS

Sequences:

>Translated_341_residues
MMRSLSPLARRRLERFRSNRRGWWSLWLFCGLFALTLGGELIANDKPLLVSYQHSLYFPVFKRYTEQQFGGELPFQPDYR
SDYVRTLISKGDGWMLFPPIPFSDDTPNYDLTTPAPSPPSAENWLGTDDQARDVMARVIFGARVSILFALALTFISALIG
ISAGALQGYYGGWVDLFGQRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAA
RALGLGDRKVIMRHILPNAMTATLSYLPFILTGAISTLTALDFLGFGMPAGSASLGELIAQGKQNLQAPWLGLTAFFALA
LILTLLVFIGEALRDAFDPRS
>Mature_341_residues
MMRSLSPLARRRLERFRSNRRGWWSLWLFCGLFALTLGGELIANDKPLLVSYQHSLYFPVFKRYTEQQFGGELPFQPDYR
SDYVRTLISKGDGWMLFPPIPFSDDTPNYDLTTPAPSPPSAENWLGTDDQARDVMARVIFGARVSILFALALTFISALIG
ISAGALQGYYGGWVDLFGQRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAA
RALGLGDRKVIMRHILPNAMTATLSYLPFILTGAISTLTALDFLGFGMPAGSASLGELIAQGKQNLQAPWLGLTAFFALA
LILTLLVFIGEALRDAFDPRS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=340, Percent_Identity=59.4117647058824, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1787498, Length=240, Percent_Identity=30.8333333333333, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787054, Length=239, Percent_Identity=30.5439330543933, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787760, Length=249, Percent_Identity=30.9236947791165, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789964, Length=223, Percent_Identity=32.2869955156951, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789889, Length=251, Percent_Identity=27.4900398406374, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787549, Length=252, Percent_Identity=26.5873015873016, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38103; Mature: 38103

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSLSPLARRRLERFRSNRRGWWSLWLFCGLFALTLGGELIANDKPLLVSYQHSLYFPV
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEHHHHHHHHH
FKRYTEQQFGGELPFQPDYRSDYVRTLISKGDGWMLFPPIPFSDDTPNYDLTTPAPSPPS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
AENWLGTDDQARDVMARVIFGARVSILFALALTFISALIGISAGALQGYYGGWVDLFGQR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH
LLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAA
HHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RALGLGDRKVIMRHILPNAMTATLSYLPFILTGAISTLTALDFLGFGMPAGSASLGELIA
HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
QGKQNLQAPWLGLTAFFALALILTLLVFIGEALRDAFDPRS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMRSLSPLARRRLERFRSNRRGWWSLWLFCGLFALTLGGELIANDKPLLVSYQHSLYFPV
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCEEEEHHHHHHHHH
FKRYTEQQFGGELPFQPDYRSDYVRTLISKGDGWMLFPPIPFSDDTPNYDLTTPAPSPPS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
AENWLGTDDQARDVMARVIFGARVSILFALALTFISALIGISAGALQGYYGGWVDLFGQR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH
LLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAA
HHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RALGLGDRKVIMRHILPNAMTATLSYLPFILTGAISTLTALDFLGFGMPAGSASLGELIA
HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
QGKQNLQAPWLGLTAFFALALILTLLVFIGEALRDAFDPRS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]