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The map label for this gene is yejB [H]

Identifier: 66046134

GI number: 66046134

Start: 3482113

End: 3483177

Strand: Direct

Name: yejB [H]

Synonym: Psyr_2903

Alternate gene names: 66046134

Gene position: 3482113-3483177 (Clockwise)

Preceding gene: 66046133

Following gene: 66046135

Centisome position: 57.14

GC content: 60.09

Gene sequence:

>1065_bases
ATGCTTGGCTATATTCTGCGGCGCCTGCTGCTGATCATCCCTACCCTGCTGTGCATTCTGCTGGTCAACTTTTTCATCGT
CCAGGCCGCTCCGGGTGGGCCTGTGGAGCAGGCCATCGCTCGCCTGCAAGGGATCGGCGGTGCCACCGTGGGCGCAGGTG
CCAGCGAGTCCGCCGGGGCCGGTCACTCCAAAGCGTCCCGCGGGCTGGACCCGGCTTTGATCAAGCAGATCGAACGTCAA
TACGGTTTCGACAAACCGCTGCACGAACGTCTCTGGCTGATGCTGAAGAACTACGCCCGACTGGATTTCGGCAGCAGTTT
CTTTCGCGGCGCTACGGTGACCGACCTCATTCTGCAGAAAATGCCGGTGTCGATATCGCTGGGGCTCTGGGCGACGTTGC
TGACCTACCTGGTGTCGATCCCGCTGGGGATTCGCAAAGCAGTCAAACACGGCAGCCAGTTCGATATCTGGAGCAGCACC
GCCATCATCATCGGCTACGCCATGCCAGCCTTCCTGTTCGCCATGCTGCTGGTGGTGGTGTTCTGTGGCGGCACGTCGCT
GAACTGGTTTCCGGTGCGCGGACTGGTCTCGGACAACTTCGAGCAACTGACCACGATCGGCAAGATCGCTGACTATTTCT
GGCACCTCGCGCTGCCGGTCTTGGCGCTGGTGATTGGTGGCTTCGCCACGCTGACCCTGCTGACCAAACATTCCTTTCTC
AACGAAATCACCCGCCAGTACGTGACCACGGCCCGCGCCAAGGGCATGAGCGAGCGGCGGGTGCTGTATGGCCATGTGTT
TCGCAATGCCATGTTGCTGGTGGTGTCGGGCATTCCGCAGGCGTTCATCAGCGTGTTCTTTGCCGGGTCGCTGCTGATCG
AGGTGATCTTCTCGCTGGATGGCCTGGGCCGCATGAGCTATGAAGCCGCTGTGTCGCGGGACTATCCGGTGGTGTTCGGC
TCGTTGTTCATCTTCACCGTGTTCGGCCTGCTGATAAAACTGATCGGCGATATCTGCTACACGCTGGTCGACCCCAGAAT
CGACTTCAGCGCGAGGAATGCATGA

Upstream 100 bases:

>100_bases
AGCCATCGAAACATGGTGGGAAATCAGCCCGACACCGCTGACCAACGAGCAATTCGCTGAAAAACGCGGCGCTTCAGCCA
TTGTTTCGGAGATGCAGTGA

Downstream 100 bases:

>100_bases
TGCGCAGCCTTTCGCCGCTGGCCCGTCGTCGCCTGGAACGTTTTCGCAGCAATCGCCGCGGCTGGTGGTCGCTGTGGCTG
TTCTGCGGGCTGTTTGCCCT

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLGYILRRLLLIIPTLLCILLVNFFIVQAAPGGPVEQAIARLQGIGGATVGAGASESAGAGHSKASRGLDPALIKQIERQ
YGFDKPLHERLWLMLKNYARLDFGSSFFRGATVTDLILQKMPVSISLGLWATLLTYLVSIPLGIRKAVKHGSQFDIWSST
AIIIGYAMPAFLFAMLLVVVFCGGTSLNWFPVRGLVSDNFEQLTTIGKIADYFWHLALPVLALVIGGFATLTLLTKHSFL
NEITRQYVTTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFG
SLFIFTVFGLLIKLIGDICYTLVDPRIDFSARNA

Sequences:

>Translated_354_residues
MLGYILRRLLLIIPTLLCILLVNFFIVQAAPGGPVEQAIARLQGIGGATVGAGASESAGAGHSKASRGLDPALIKQIERQ
YGFDKPLHERLWLMLKNYARLDFGSSFFRGATVTDLILQKMPVSISLGLWATLLTYLVSIPLGIRKAVKHGSQFDIWSST
AIIIGYAMPAFLFAMLLVVVFCGGTSLNWFPVRGLVSDNFEQLTTIGKIADYFWHLALPVLALVIGGFATLTLLTKHSFL
NEITRQYVTTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFG
SLFIFTVFGLLIKLIGDICYTLVDPRIDFSARNA
>Mature_354_residues
MLGYILRRLLLIIPTLLCILLVNFFIVQAAPGGPVEQAIARLQGIGGATVGAGASESAGAGHSKASRGLDPALIKQIERQ
YGFDKPLHERLWLMLKNYARLDFGSSFFRGATVTDLILQKMPVSISLGLWATLLTYLVSIPLGIRKAVKHGSQFDIWSST
AIIIGYAMPAFLFAMLLVVVFCGGTSLNWFPVRGLVSDNFEQLTTIGKIADYFWHLALPVLALVIGGFATLTLLTKHSFL
NEITRQYVTTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLDGLGRMSYEAAVSRDYPVVFG
SLFIFTVFGLLIKLIGDICYTLVDPRIDFSARNA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=61.3698630136986, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI1789965, Length=365, Percent_Identity=32.6027397260274, Blast_Score=157, Evalue=8e-40,
Organism=Escherichia coli, GI1787497, Length=350, Percent_Identity=28.5714285714286, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1787053, Length=350, Percent_Identity=30.5714285714286, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1789888, Length=347, Percent_Identity=27.6657060518732, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787550, Length=261, Percent_Identity=25.6704980842912, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787761, Length=290, Percent_Identity=25.5172413793103, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38778; Mature: 38778

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYILRRLLLIIPTLLCILLVNFFIVQAAPGGPVEQAIARLQGIGGATVGAGASESAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GHSKASRGLDPALIKQIERQYGFDKPLHERLWLMLKNYARLDFGSSFFRGATVTDLILQK
CCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
MPVSISLGLWATLLTYLVSIPLGIRKAVKHGSQFDIWSSTAIIIGYAMPAFLFAMLLVVV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FCGGTSLNWFPVRGLVSDNFEQLTTIGKIADYFWHLALPVLALVIGGFATLTLLTKHSFL
HHCCCCCCCEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEITRQYVTTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GLGRMSYEAAVSRDYPVVFGSLFIFTVFGLLIKLIGDICYTLVDPRIDFSARNA
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLGYILRRLLLIIPTLLCILLVNFFIVQAAPGGPVEQAIARLQGIGGATVGAGASESAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GHSKASRGLDPALIKQIERQYGFDKPLHERLWLMLKNYARLDFGSSFFRGATVTDLILQK
CCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
MPVSISLGLWATLLTYLVSIPLGIRKAVKHGSQFDIWSSTAIIIGYAMPAFLFAMLLVVV
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FCGGTSLNWFPVRGLVSDNFEQLTTIGKIADYFWHLALPVLALVIGGFATLTLLTKHSFL
HHCCCCCCCEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEITRQYVTTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLLIEVIFSLD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
GLGRMSYEAAVSRDYPVVFGSLFIFTVFGLLIKLIGDICYTLVDPRIDFSARNA
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]