| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046125
Identifier: 66046125
GI number: 66046125
Start: 3473200
End: 3473658
Strand: Direct
Name: 66046125
Synonym: Psyr_2894
Alternate gene names: NA
Gene position: 3473200-3473658 (Clockwise)
Preceding gene: 66046117
Following gene: 66046130
Centisome position: 57.0
GC content: 59.04
Gene sequence:
>459_bases ATGTACAAGAAAGTTGAATGGCCGCTGACGCTTTACTTTGATGGTGACTGCCCGCTCTGCGCTCGAGAAGTCAGAACCCT GCGCGCCCATGCAAAGCCTGAGCGGCTTTTGTTCGTGGATATCCGTGATGACGCCTTTGACGCCACTTCACTGGGATTCA CACTTGAGGATATGGAGTCGTTACTGCACGCCAGATTCAGCGATGACACGTGGATCAAGGGTCTGGACGCGACACTCTGG AGTTGGCGAGCGGCCGGGCTGGGTGCATGGGTCGCGCCGCTGTCATGGCGATTCATGAGGCCAGTGTTTAACCTGGGCTA CCGGCTTTTCTGCCGCTCGCGCCCTTACCTTGCCTGGCTGCCCCACCCTGACGGCAGCCGCCGTTGCAGTAGCAACAGCT GTGCGGTCCCGGGCGCAAAACCTGCTTCGGCCAAGCGGACGTCCACTACAGAGAAGTAA
Upstream 100 bases:
>100_bases GGTAGTACTCGAAACCCAAGGCCCGGATGACCGCCACCGCCCATTGTCAGCAAGGTCTTTTGAGCATAAGGTGTAAAAAA CCTATACAAGACTACTAGCG
Downstream 100 bases:
>100_bases ACCGGGAATGCATACCGCAGAAACGAAAAAAGACGCCTAGGCGTCTTTTTTGCTGATTCACAAAGCCCGGAGGGTTCAGT GAATCAATGTTTGGAGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Thiol-Disulfide Oxidoreductase DCC; Potential Redox Protein; Redox Protein; Inhibitor
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MYKKVEWPLTLYFDGDCPLCAREVRTLRAHAKPERLLFVDIRDDAFDATSLGFTLEDMESLLHARFSDDTWIKGLDATLW SWRAAGLGAWVAPLSWRFMRPVFNLGYRLFCRSRPYLAWLPHPDGSRRCSSNSCAVPGAKPASAKRTSTTEK
Sequences:
>Translated_152_residues MYKKVEWPLTLYFDGDCPLCAREVRTLRAHAKPERLLFVDIRDDAFDATSLGFTLEDMESLLHARFSDDTWIKGLDATLW SWRAAGLGAWVAPLSWRFMRPVFNLGYRLFCRSRPYLAWLPHPDGSRRCSSNSCAVPGAKPASAKRTSTTEK >Mature_152_residues MYKKVEWPLTLYFDGDCPLCAREVRTLRAHAKPERLLFVDIRDDAFDATSLGFTLEDMESLLHARFSDDTWIKGLDATLW SWRAAGLGAWVAPLSWRFMRPVFNLGYRLFCRSRPYLAWLPHPDGSRRCSSNSCAVPGAKPASAKRTSTTEK
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17359; Mature: 17359
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKKVEWPLTLYFDGDCPLCAREVRTLRAHAKPERLLFVDIRDDAFDATSLGFTLEDMES CCCEECCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHCCEEHHHHHH LLHARFSDDTWIKGLDATLWSWRAAGLGAWVAPLSWRFMRPVFNLGYRLFCRSRPYLAWL HHHHCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEC PHPDGSRRCSSNSCAVPGAKPASAKRTSTTEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYKKVEWPLTLYFDGDCPLCAREVRTLRAHAKPERLLFVDIRDDAFDATSLGFTLEDMES CCCEECCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHCCEEHHHHHH LLHARFSDDTWIKGLDATLWSWRAAGLGAWVAPLSWRFMRPVFNLGYRLFCRSRPYLAWL HHHHCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEC PHPDGSRRCSSNSCAVPGAKPASAKRTSTTEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA