| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046012
Identifier: 66046012
GI number: 66046012
Start: 3362430
End: 3363095
Strand: Direct
Name: 66046012
Synonym: Psyr_2776
Alternate gene names: NA
Gene position: 3362430-3363095 (Clockwise)
Preceding gene: 66045999
Following gene: 66046035
Centisome position: 55.18
GC content: 51.95
Gene sequence:
>666_bases TTGGAGCGAGCCGTCTTATACAGTTTCGAGGTCGAAACACCCATACCTGGGATGCCCGCCGTGACCCGCGTTCCTTTCTT GCCAATATTAGTCGTAAATCCCTTACCGCCGATCGAGGTACTGACCCCGCTTTTACTCACGTTGAGACGAACACCAGGAG CGATTTTGAAGCTTTTACGTATGCGCAGGGCCATGGATTCAGTTCCTTTGAATAACCAATATCACGGAGCCACCATTATA CGCTCGTTTTCGAGATCAGGAAGGCTGTCCACACATCCAGCGTGGATGGAATGCCAGTGGCGTCAAAACAGTTCGAGTAG TAGCGTCTTGCCTCGCTTGACGCTTACCCAACGAGTTCCACTTATGAACGATCCAAAACAGGCTCTCGATAAAATAGAGG ATCTCCTCAGCGCCGCACGCGGCACTGACGATCTGTTTCAGCGTGCTGCGGCCTTCAGTGCGATATCCATCCTTGTGAAG AACTTGGATGACTATTTCAAAGAGCGTGCCCCATACGCTGGTGAAAATATTGAGCGTCTGCGCTCTCACGCATCGTCAAT GCTCGGATACGACGTGACGCTTGGCCACAGCACAGAGCAGCATCACGTCTGGGCTCTATCTGCAATTTCGGCGCTGAGCG AAGCTCTCGACAAGCTCGGTAGATAA
Upstream 100 bases:
>100_bases TCATTTACGGAATACTGCCCAAAGCACGCCTATTACAATCAGAGCTGCAAAAACGTAAGAGCCGACGCCTGGCTTAGCGG CCGAGCCAGGGTCGTTTGGA
Downstream 100 bases:
>100_bases AGGATTTTCCGGTCACTGGCCCTGTCGCATCACGTGGTCGAGTATGCTTCTTTGTGCCTGAGAATCAGGCGAGTCCTGTC CAGCCAAGGGCCGCCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MERAVLYSFEVETPIPGMPAVTRVPFLPILVVNPLPPIEVLTPLLLTLRRTPGAILKLLRMRRAMDSVPLNNQYHGATII RSFSRSGRLSTHPAWMECQWRQNSSSSSVLPRLTLTQRVPLMNDPKQALDKIEDLLSAARGTDDLFQRAAAFSAISILVK NLDDYFKERAPYAGENIERLRSHASSMLGYDVTLGHSTEQHHVWALSAISALSEALDKLGR
Sequences:
>Translated_221_residues MERAVLYSFEVETPIPGMPAVTRVPFLPILVVNPLPPIEVLTPLLLTLRRTPGAILKLLRMRRAMDSVPLNNQYHGATII RSFSRSGRLSTHPAWMECQWRQNSSSSSVLPRLTLTQRVPLMNDPKQALDKIEDLLSAARGTDDLFQRAAAFSAISILVK NLDDYFKERAPYAGENIERLRSHASSMLGYDVTLGHSTEQHHVWALSAISALSEALDKLGR >Mature_221_residues MERAVLYSFEVETPIPGMPAVTRVPFLPILVVNPLPPIEVLTPLLLTLRRTPGAILKLLRMRRAMDSVPLNNQYHGATII RSFSRSGRLSTHPAWMECQWRQNSSSSSVLPRLTLTQRVPLMNDPKQALDKIEDLLSAARGTDDLFQRAAAFSAISILVK NLDDYFKERAPYAGENIERLRSHASSMLGYDVTLGHSTEQHHVWALSAISALSEALDKLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24696; Mature: 24696
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERAVLYSFEVETPIPGMPAVTRVPFLPILVVNPLPPIEVLTPLLLTLRRTPGAILKLLR CCCEEEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH MRRAMDSVPLNNQYHGATIIRSFSRSGRLSTHPAWMECQWRQNSSSSSVLPRLTLTQRVP HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCC LMNDPKQALDKIEDLLSAARGTDDLFQRAAAFSAISILVKNLDDYFKERAPYAGENIERL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RSHASSMLGYDVTLGHSTEQHHVWALSAISALSEALDKLGR HHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MERAVLYSFEVETPIPGMPAVTRVPFLPILVVNPLPPIEVLTPLLLTLRRTPGAILKLLR CCCEEEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH MRRAMDSVPLNNQYHGATIIRSFSRSGRLSTHPAWMECQWRQNSSSSSVLPRLTLTQRVP HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHCCC LMNDPKQALDKIEDLLSAARGTDDLFQRAAAFSAISILVKNLDDYFKERAPYAGENIERL CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RSHASSMLGYDVTLGHSTEQHHVWALSAISALSEALDKLGR HHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA