| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045986
Identifier: 66045986
GI number: 66045986
Start: 3338779
End: 3339171
Strand: Reverse
Name: 66045986
Synonym: Psyr_2750
Alternate gene names: NA
Gene position: 3339171-3338779 (Counterclockwise)
Preceding gene: 66045987
Following gene: 66045985
Centisome position: 54.8
GC content: 57.76
Gene sequence:
>393_bases ATGGAAAAGTTCGATATACACCGTAAAACCCGATTCGACTCGCTGGTACACGAGTACGGACTGGATGGCAGCCGCCTGCT GCCGTGGGAAGGCTACCCGATGCCGTTCGCCGGCGGCTGGTGCGTGGTCCGTCCGGGCACCTGCAGCGAAGCACACACCC AGATCGATCAGGAAATCTTCATTGCCATCAAGGGCAGTGCGCGTCTGGTTGTCGGTGACCGGCAGATGGATTTCACCGTT GGCGATATCGCCGCGATTCCGAAACACACCAACCATTACGTCATCAATGAGTCCGCCGAGGACTTCCACTTCTATGTGGT CTGGTGGGACATGAACTACGTGAATGCGTTCGTGGCGCAGCACAGCGAGACCACGGGGTGCCTGGATGAGTAA
Upstream 100 bases:
>100_bases AGAAAATGGATAGTTCGACCCTGAGCTATCCGGCAATCGGATAGCCAACAATTGGCAACAATTTCATGCTTTGCCGCACT TGAAACGTACGGGACTGAGC
Downstream 100 bases:
>100_bases GTTCATCGTCACCATCACGCCCCCGACCCCCAACGGCGATTTGCACATAGGCCATATCGCCGGGCCGTTTCTGGCCGCTG ATGTCTTCACCCGCGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MEKFDIHRKTRFDSLVHEYGLDGSRLLPWEGYPMPFAGGWCVVRPGTCSEAHTQIDQEIFIAIKGSARLVVGDRQMDFTV GDIAAIPKHTNHYVINESAEDFHFYVVWWDMNYVNAFVAQHSETTGCLDE
Sequences:
>Translated_130_residues MEKFDIHRKTRFDSLVHEYGLDGSRLLPWEGYPMPFAGGWCVVRPGTCSEAHTQIDQEIFIAIKGSARLVVGDRQMDFTV GDIAAIPKHTNHYVINESAEDFHFYVVWWDMNYVNAFVAQHSETTGCLDE >Mature_130_residues MEKFDIHRKTRFDSLVHEYGLDGSRLLPWEGYPMPFAGGWCVVRPGTCSEAHTQIDQEIFIAIKGSARLVVGDRQMDFTV GDIAAIPKHTNHYVINESAEDFHFYVVWWDMNYVNAFVAQHSETTGCLDE
Specific function: Unknown
COG id: COG2140
COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14883; Mature: 14883
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFDIHRKTRFDSLVHEYGLDGSRLLPWEGYPMPFAGGWCVVRPGTCSEAHTQIDQEIF CCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHCCCCEEE IAIKGSARLVVGDRQMDFTVGDIAAIPKHTNHYVINESAEDFHFYVVWWDMNYVNAFVAQ EEECCCEEEEECCCCCEEEECCEEECCCCCCEEEECCCCCCEEEEEEEEECCHHHHHHHC HSETTGCLDE CCCCCCCCCC >Mature Secondary Structure MEKFDIHRKTRFDSLVHEYGLDGSRLLPWEGYPMPFAGGWCVVRPGTCSEAHTQIDQEIF CCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHCCCCEEE IAIKGSARLVVGDRQMDFTVGDIAAIPKHTNHYVINESAEDFHFYVVWWDMNYVNAFVAQ EEECCCEEEEECCCCCEEEECCEEECCCCCCEEEECCCCCCEEEEEEEEECCHHHHHHHC HSETTGCLDE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA