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The map label for this gene is ftrA [H]

Identifier: 66045976

GI number: 66045976

Start: 3326020

End: 3326973

Strand: Direct

Name: ftrA [H]

Synonym: Psyr_2740

Alternate gene names: 66045976

Gene position: 3326020-3326973 (Clockwise)

Preceding gene: 66045971

Following gene: 66045988

Centisome position: 54.58

GC content: 62.37

Gene sequence:

>954_bases
ATGAAAAATCATCTCGTCGTCGCACTCATCTACAACCAGCTGTGCACTTTCGAATTTGGCTGCACGGTTGAAGTCTTTGC
GCTGAAAAGACCCGAGCTGGGCGTCAGTTGGTACGAGTTCGCGACCTTCCCGGTCGACGAAGGCCCGATCACCGCTGCCG
GGGGCATCACCATCGTGCCGACACCCGGCGAGGTGCTGCTGGAAAACGCCGACACGATCATCGTGCCGGGCTGGCGCGGG
GTTGAATCAGAGGTTCCGCAACGGCTCATCGAACAGCTCCAGGCGGCTCATGCACGCGGCGCGCGAATCTGCTCGATCTG
TACCGGGGCCTTCGTCCTGGCGGCGGCCGGTCTGCTCGACGGGCACAAGGTGACGACCCACTGGCGCTACACCGACCTGC
TGGCCACCATGTACCCGGGCCTGACCATTCAGCCCAACGAACTGTATGTGGATCAGGGCAGCATCGTGACCGCAGCAGGC
TCGGCCGCCGGGCTGGACATGATGCTGCACCTGGTGCGCAACGATCACGGCTCGCGCGTTGCCAACATGGTTGCGCAGCG
CATGGTCATTCCGCCGCATCGCGAAGGCGGACAATCGCAATATGCATCCCGGCAACTGGTATCGGCCAGCGACGGGCCGA
TTTCCAACCTGATGGACTGGATTCGCAGCGACCTGCAGCGCCCCCATACCATCAAGGAAATGGCCTCACGCGCAGCGCTC
AGTACCCGCACCTTGCACCGCAGCTTCATGGAAAGTACCGGGCTGACGCCTTACGACTGGCTGCTCGGTGAGCGCATTGC
CTACGCCAAGGAACTGCTGGAATCGTCGAAATTGCGCCTGAATGAAGTGGTGGACCGCGCCGGCTTCGGCTCCGAAGAGT
CGTTTCGCCGGCACTTCCGCAATCTGGTGGGCATCAGCCCGAGCAGCTACCGCAAGCAATTTGCCCGGGCCTGA

Upstream 100 bases:

>100_bases
GTGAGGGTTAAGCGGGTTTCAGCGGTGACACAGAGCAGATTACTCAGTAGCATCACGTCAAACTACTGGCTGAAATGCCA
ATATCCGGTAACATCGCGCC

Downstream 100 bases:

>100_bases
CCCCCAGCTTGGGGTAAAGCGCATCGACGATTGCGTCGGCAAACTCGCCCCACGCGCCGGCAACCGCCGTGTTGGTCAGG
ACCACCATGCTCAGCGCAGC

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKNHLVVALIYNQLCTFEFGCTVEVFALKRPELGVSWYEFATFPVDEGPITAAGGITIVPTPGEVLLENADTIIVPGWRG
VESEVPQRLIEQLQAAHARGARICSICTGAFVLAAAGLLDGHKVTTHWRYTDLLATMYPGLTIQPNELYVDQGSIVTAAG
SAAGLDMMLHLVRNDHGSRVANMVAQRMVIPPHREGGQSQYASRQLVSASDGPISNLMDWIRSDLQRPHTIKEMASRAAL
STRTLHRSFMESTGLTPYDWLLGERIAYAKELLESSKLRLNEVVDRAGFGSEESFRRHFRNLVGISPSSYRKQFARA

Sequences:

>Translated_317_residues
MKNHLVVALIYNQLCTFEFGCTVEVFALKRPELGVSWYEFATFPVDEGPITAAGGITIVPTPGEVLLENADTIIVPGWRG
VESEVPQRLIEQLQAAHARGARICSICTGAFVLAAAGLLDGHKVTTHWRYTDLLATMYPGLTIQPNELYVDQGSIVTAAG
SAAGLDMMLHLVRNDHGSRVANMVAQRMVIPPHREGGQSQYASRQLVSASDGPISNLMDWIRSDLQRPHTIKEMASRAAL
STRTLHRSFMESTGLTPYDWLLGERIAYAKELLESSKLRLNEVVDRAGFGSEESFRRHFRNLVGISPSSYRKQFARA
>Mature_317_residues
MKNHLVVALIYNQLCTFEFGCTVEVFALKRPELGVSWYEFATFPVDEGPITAAGGITIVPTPGEVLLENADTIIVPGWRG
VESEVPQRLIEQLQAAHARGARICSICTGAFVLAAAGLLDGHKVTTHWRYTDLLATMYPGLTIQPNELYVDQGSIVTAAG
SAAGLDMMLHLVRNDHGSRVANMVAQRMVIPPHREGGQSQYASRQLVSASDGPISNLMDWIRSDLQRPHTIKEMASRAAL
STRTLHRSFMESTGLTPYDWLLGERIAYAKELLESSKLRLNEVVDRAGFGSEESFRRHFRNLVGISPSSYRKQFARA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35010; Mature: 35010

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHLVVALIYNQLCTFEFGCTVEVFALKRPELGVSWYEFATFPVDEGPITAAGGITIVP
CCCCEEEHEEHHHHHHEECCCCEEEEEECCCCCCCCHHHEEECCCCCCCEEECCCEEEEC
TPGEVLLENADTIIVPGWRGVESEVPQRLIEQLQAAHARGARICSICTGAFVLAAAGLLD
CCCHHHEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
GHKVTTHWRYTDLLATMYPGLTIQPNELYVDQGSIVTAAGSAAGLDMMLHLVRNDHGSRV
CCEEEEEHHHHHHHHHHCCCCEECCCEEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHH
ANMVAQRMVIPPHREGGQSQYASRQLVSASDGPISNLMDWIRSDLQRPHTIKEMASRAAL
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
STRTLHRSFMESTGLTPYDWLLGERIAYAKELLESSKLRLNEVVDRAGFGSEESFRRHFR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLVGISPSSYRKQFARA
HHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MKNHLVVALIYNQLCTFEFGCTVEVFALKRPELGVSWYEFATFPVDEGPITAAGGITIVP
CCCCEEEHEEHHHHHHEECCCCEEEEEECCCCCCCCHHHEEECCCCCCCEEECCCEEEEC
TPGEVLLENADTIIVPGWRGVESEVPQRLIEQLQAAHARGARICSICTGAFVLAAAGLLD
CCCHHHEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
GHKVTTHWRYTDLLATMYPGLTIQPNELYVDQGSIVTAAGSAAGLDMMLHLVRNDHGSRV
CCEEEEEHHHHHHHHHHCCCCEECCCEEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHH
ANMVAQRMVIPPHREGGQSQYASRQLVSASDGPISNLMDWIRSDLQRPHTIKEMASRAAL
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
STRTLHRSFMESTGLTPYDWLLGERIAYAKELLESSKLRLNEVVDRAGFGSEESFRRHFR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
NLVGISPSSYRKQFARA
HHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]