| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045968
Identifier: 66045968
GI number: 66045968
Start: 3316494
End: 3317441
Strand: Reverse
Name: 66045968
Synonym: Psyr_2732
Alternate gene names: NA
Gene position: 3317441-3316494 (Counterclockwise)
Preceding gene: 66045969
Following gene: 66045966
Centisome position: 54.44
GC content: 56.65
Gene sequence:
>948_bases ATGCCCAAGTCTGTCTTGCGTACCGTTGCGACCGTATCATTCATCGCCCTGTCATCGACTGCATACGCCTATGACTTGCC CGGCCTCAACCTGGGCAACACCAGTTTCTACGACGGATCCCCGGCGCCTGCGGGGCCGGGCTGGTATCTGGAGGAGTATC TGAACTATGCCAAGGCCAATCGCTTCAATGACGTGAATGGCGACAAACTGCAACTTCCCAAACAGGACGTGGATGTATTG GCGGTGACTACGCAGATCATCTACGTCGGTCAGCCAATGGCCAATGGGGCCATGCCGGGTATTACCGCAATCAACACGTC GTTGGCGCATGTCGACGTGGATGACGGTCTGGGCAACACCGCCCTGAGTTCGCGCGCCGGTTTCGGCGATCTGGTCATCG GCCCGTTTCTGCAACTGCCGACGATCACCCGTGCCGATGGCAGTCCGCTGCTGACCCAGCGTATCGAGGCGGACATTGCG ATTCCGATCGGTGCCTACGATCGCAATCGCTCGATCAACCCCGGGAGCAATTTCTGGTCATTCAACCCGTACTACGCCGC GACTTACTGGTTTTCGCCGAAATGGTCGGCCAGCGGACGTTTCATGTATTTGTGGAACGGCAAGAATGATGACCCGCAAG CCGGGTTCGGCAATGTTTCCGATACGCAGGCAGGGCAGGCGCTGCACGCCAACCTGACCTTGCAATATGCGGTTAACGAG CAACTTTCGCTGGGGCTCAACGGTTACTGGCTCAAGCAGTTCACGGACACCCAGGTGGATGGACATGATGTCAGCGGTCG CAAGGAAAAGGTTTGGGCCATTGGCCCTGGCTTCCTGTATGCCTTTAACAAGGAGAACGTGCTGACGGTCAATAGTTACT TCGAACAGGGCGCGGAAAACCGCACCGAAGGTAATAAGCTGGTGCTGAATTTTCTGCACAAGCTGTAA
Upstream 100 bases:
>100_bases CGCTTCTTACGTGTAATGGCTGCACGTGTTGCAACCCCGGCGACGCGCTCGTGGCGTCGGGGCTATTGAAAACAACAACA ATAAGTACAGGAATCACAAG
Downstream 100 bases:
>100_bases GGCATGAGATAGTTTTGACTATCGTTCCAACGCTCCGCGTTGGAATGCAGTTCGTGACGCTCTGCGTCACACAAGGGTTC TGCTATGTCAGGTGGACTGA
Product: putative signal peptide
Products: NA
Alternate protein names: Meta-Pathway Phenol Degradation-Like Protein; Protein Involved In Meta-Pathway Of Phenol Degradation; Signal Peptide; Phenol Degradation-Like Protein; Phenol Metabolism Protein; Regulatory Protein Involved In In Phenol Degradation; Regulation Of Phenolics Degradation Protein; Protein Involved In Meta-Pathway Of Phenol Degradation-Like; Meta-Pathway Phenol Degradation Protein; Involved In Meta-Pathway Of Phenol Degradation Protein; MetA-Pathway Phenol Degradation-Like Protein; Secreted Protein; Lipoprotein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPKSVLRTVATVSFIALSSTAYAYDLPGLNLGNTSFYDGSPAPAGPGWYLEEYLNYAKANRFNDVNGDKLQLPKQDVDVL AVTTQIIYVGQPMANGAMPGITAINTSLAHVDVDDGLGNTALSSRAGFGDLVIGPFLQLPTITRADGSPLLTQRIEADIA IPIGAYDRNRSINPGSNFWSFNPYYAATYWFSPKWSASGRFMYLWNGKNDDPQAGFGNVSDTQAGQALHANLTLQYAVNE QLSLGLNGYWLKQFTDTQVDGHDVSGRKEKVWAIGPGFLYAFNKENVLTVNSYFEQGAENRTEGNKLVLNFLHKL
Sequences:
>Translated_315_residues MPKSVLRTVATVSFIALSSTAYAYDLPGLNLGNTSFYDGSPAPAGPGWYLEEYLNYAKANRFNDVNGDKLQLPKQDVDVL AVTTQIIYVGQPMANGAMPGITAINTSLAHVDVDDGLGNTALSSRAGFGDLVIGPFLQLPTITRADGSPLLTQRIEADIA IPIGAYDRNRSINPGSNFWSFNPYYAATYWFSPKWSASGRFMYLWNGKNDDPQAGFGNVSDTQAGQALHANLTLQYAVNE QLSLGLNGYWLKQFTDTQVDGHDVSGRKEKVWAIGPGFLYAFNKENVLTVNSYFEQGAENRTEGNKLVLNFLHKL >Mature_314_residues PKSVLRTVATVSFIALSSTAYAYDLPGLNLGNTSFYDGSPAPAGPGWYLEEYLNYAKANRFNDVNGDKLQLPKQDVDVLA VTTQIIYVGQPMANGAMPGITAINTSLAHVDVDDGLGNTALSSRAGFGDLVIGPFLQLPTITRADGSPLLTQRIEADIAI PIGAYDRNRSINPGSNFWSFNPYYAATYWFSPKWSASGRFMYLWNGKNDDPQAGFGNVSDTQAGQALHANLTLQYAVNEQ LSLGLNGYWLKQFTDTQVDGHDVSGRKEKVWAIGPGFLYAFNKENVLTVNSYFEQGAENRTEGNKLVLNFLHKL
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34442; Mature: 34311
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSVLRTVATVSFIALSSTAYAYDLPGLNLGNTSFYDGSPAPAGPGWYLEEYLNYAKAN CCHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC RFNDVNGDKLQLPKQDVDVLAVTTQIIYVGQPMANGAMPGITAINTSLAHVDVDDGLGNT CCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCC ALSSRAGFGDLVIGPFLQLPTITRADGSPLLTQRIEADIAIPIGAYDRNRSINPGSNFWS HHHCCCCCCCEEHHHHHCCCEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC FNPYYAATYWFSPKWSASGRFMYLWNGKNDDPQAGFGNVSDTQAGQALHANLTLQYAVNE CCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECC QLSLGLNGYWLKQFTDTQVDGHDVSGRKEKVWAIGPGFLYAFNKENVLTVNSYFEQGAEN EEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEHHHHHCCCCC RTEGNKLVLNFLHKL CCCCCHHHHHHHHHC >Mature Secondary Structure PKSVLRTVATVSFIALSSTAYAYDLPGLNLGNTSFYDGSPAPAGPGWYLEEYLNYAKAN CHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC RFNDVNGDKLQLPKQDVDVLAVTTQIIYVGQPMANGAMPGITAINTSLAHVDVDDGLGNT CCCCCCCCEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCC ALSSRAGFGDLVIGPFLQLPTITRADGSPLLTQRIEADIAIPIGAYDRNRSINPGSNFWS HHHCCCCCCCEEHHHHHCCCEEECCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC FNPYYAATYWFSPKWSASGRFMYLWNGKNDDPQAGFGNVSDTQAGQALHANLTLQYAVNE CCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECC QLSLGLNGYWLKQFTDTQVDGHDVSGRKEKVWAIGPGFLYAFNKENVLTVNSYFEQGAEN EEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEHHHHHCCCCC RTEGNKLVLNFLHKL CCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA