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The map label for this gene is arnC [H]

Identifier: 66045926

GI number: 66045926

Start: 3266168

End: 3267181

Strand: Direct

Name: arnC [H]

Synonym: Psyr_2690

Alternate gene names: 66045926

Gene position: 3266168-3267181 (Clockwise)

Preceding gene: 66045925

Following gene: 66045927

Centisome position: 53.6

GC content: 60.55

Gene sequence:

>1014_bases
TTGAAACCGTATCCGATCAAGTTCGTGTCGATCGTCATCCCTGTCTACAACGAGCGACAAAGCCTGCCAGAGTTGTTGCG
CCGTACTGAAGCGGCCTGCGAACAGCTCGACCACCGCTTCGAAATCGTGCTGGTCGACGATGGCAGCCGCGACGACTCGA
CAGACATCCTCCAGCGGGCTGCCGAGCGCGCCGACAGCCCCTTTGTCGCAGTGATCCTGAATCGAAACTACGGTCAGCAC
GCCGCCATCATGGCCGGATTCGAGCAGTGCCAGGGCGACGTGGTCATCACCCTCGATGCCGACCTGCAGAATCCTCCCGA
GGAAATCCCTCGTCTGGTAAAGCTCGCTGAACAGGGGTACGACGTGGTCGGCACGGTGCGCAGCAATCGTCAGGACTCCG
CCTGGCGACGCTGGCCCTCGAAACTCATCAACCTGGCCGTGCAGCGCTCCACCGGCGTGGCCATGAACGATTACGGCTGC
ATGCTGCGCGCATACCGACGCACGATTGTCGACGCCATGCTCGCCTGCCGCGAGCGCAGCACGTTCATTCCGATTCTGGC
GAACAGTTTTGCGCGACACACCACCGAGGTGTTGGTCGATCACGCCGAACGCGAGCACGGCGACTCCAAATACAGCCCGA
TGCGTCTGATCAACCTCATGTTCGACCTGATCACCTGCATGACCACCACGCCCTTGCGCCTGCTCAGCATCATCGGCTTC
AGCATGGCGTTGCTCGGTGTCTTGTTCGCGGCGCTGCTGATCGTTCTGCGCCTGATCTTCGGCGCGTCATGGGCCGGGGA
CGGCATGTTCGTACTGTTTGCCGTGCTGTTCGTATTCACCGGCGGGCAGTTCATCGGCATGGGACTGCTGGGTGAATACC
TGGGCCGGATGTACAGCGATGTGCGTGCGCGTCCGCGGTTCTTCATCGAAAAAATCGTGCGCAGCTCGTCACCGGTTGCC
ACCGACAGCATTGATTCCTCTGTAACTCCCTATATGAACAAGGTCGCGCCATGA

Upstream 100 bases:

>100_bases
ATTCATCACGGCTGTGTTCCATCCCCCTGTTCCCCGACATGAGCCTCGATGATGTCGAGCGGGTTGTCGGTGCCATTGAA
TCGACCCTGGAATCCAGCCA

Downstream 100 bases:

>100_bases
GCACTAAAGCTGTCGTTTTCGCTTATCACGATATTGGCTGTGTCGGCCTGCAAGCGTTGCTGGATGCAGGCTATGAGATT
GCGGCGGTGTTCACCCATGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKPYPIKFVSIVIPVYNERQSLPELLRRTEAACEQLDHRFEIVLVDDGSRDDSTDILQRAAERADSPFVAVILNRNYGQH
AAIMAGFEQCQGDVVITLDADLQNPPEEIPRLVKLAEQGYDVVGTVRSNRQDSAWRRWPSKLINLAVQRSTGVAMNDYGC
MLRAYRRTIVDAMLACRERSTFIPILANSFARHTTEVLVDHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIIGF
SMALLGVLFAALLIVLRLIFGASWAGDGMFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSDVRARPRFFIEKIVRSSSPVA
TDSIDSSVTPYMNKVAP

Sequences:

>Translated_337_residues
MKPYPIKFVSIVIPVYNERQSLPELLRRTEAACEQLDHRFEIVLVDDGSRDDSTDILQRAAERADSPFVAVILNRNYGQH
AAIMAGFEQCQGDVVITLDADLQNPPEEIPRLVKLAEQGYDVVGTVRSNRQDSAWRRWPSKLINLAVQRSTGVAMNDYGC
MLRAYRRTIVDAMLACRERSTFIPILANSFARHTTEVLVDHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIIGF
SMALLGVLFAALLIVLRLIFGASWAGDGMFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSDVRARPRFFIEKIVRSSSPVA
TDSIDSSVTPYMNKVAP
>Mature_337_residues
MKPYPIKFVSIVIPVYNERQSLPELLRRTEAACEQLDHRFEIVLVDDGSRDDSTDILQRAAERADSPFVAVILNRNYGQH
AAIMAGFEQCQGDVVITLDADLQNPPEEIPRLVKLAEQGYDVVGTVRSNRQDSAWRRWPSKLINLAVQRSTGVAMNDYGC
MLRAYRRTIVDAMLACRERSTFIPILANSFARHTTEVLVDHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIIGF
SMALLGVLFAALLIVLRLIFGASWAGDGMFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSDVRARPRFFIEKIVRSSSPVA
TDSIDSSVTPYMNKVAP

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=233, Percent_Identity=24.0343347639485, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1788588, Length=314, Percent_Identity=65.9235668789809, Blast_Score=449, Evalue=1e-127,
Organism=Escherichia coli, GI1788692, Length=312, Percent_Identity=32.0512820512821, Blast_Score=162, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6325441, Length=117, Percent_Identity=29.0598290598291, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585265, Length=233, Percent_Identity=24.4635193133047, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37793; Mature: 37793

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYPIKFVSIVIPVYNERQSLPELLRRTEAACEQLDHRFEIVLVDDGSRDDSTDILQRA
CCCCCEEEEHEEEHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH
AERADSPFVAVILNRNYGQHAAIMAGFEQCQGDVVITLDADLQNPPEEIPRLVKLAEQGY
HHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
DVVGTVRSNRQDSAWRRWPSKLINLAVQRSTGVAMNDYGCMLRAYRRTIVDAMLACRERS
CEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCC
TFIPILANSFARHTTEVLVDHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIIGF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SMALLGVLFAALLIVLRLIFGASWAGDGMFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRARPRFFIEKIVRSSSPVATDSIDSSVTPYMNKVAP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MKPYPIKFVSIVIPVYNERQSLPELLRRTEAACEQLDHRFEIVLVDDGSRDDSTDILQRA
CCCCCEEEEHEEEHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHH
AERADSPFVAVILNRNYGQHAAIMAGFEQCQGDVVITLDADLQNPPEEIPRLVKLAEQGY
HHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
DVVGTVRSNRQDSAWRRWPSKLINLAVQRSTGVAMNDYGCMLRAYRRTIVDAMLACRERS
CEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHCC
TFIPILANSFARHTTEVLVDHAEREHGDSKYSPMRLINLMFDLITCMTTTPLRLLSIIGF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SMALLGVLFAALLIVLRLIFGASWAGDGMFVLFAVLFVFTGGQFIGMGLLGEYLGRMYSD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VRARPRFFIEKIVRSSSPVATDSIDSSVTPYMNKVAP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA